RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 SLC11A1P49279 550 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 NR5A1Q13285 461 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
MRPL55-231ENST00000492170 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
MRPL55-231ENST00000492170 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 ALYREFQ86V81 257 aaKnown RBP17.11■□□□□ 0.33
MRPL55-231ENST00000492170 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 MTRQ99707 1265 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
MRPL55-231ENST00000492170 FAM205CA6NFA0 338 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
MRPL55-231ENST00000492170 ERLIN2O94905 339 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 MRPL10Q7Z7H8 261 aaKnown RBP17.1■□□□□ 0.33
MRPL55-231ENST00000492170 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 BCL7CQ8WUZ0 217 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-231ENST00000492170 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 FAM193BQ96PV7 902 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-231ENST00000492170 POMKQ9H5K3 350 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
MRPL55-231ENST00000492170 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 HOXA11P31270 313 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 TFDP1Q14186 410 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 PCBP1Q15365 356 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 CALCRLQ16602 461 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 RARS2Q5T160 578 aaKnown RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 ZNF280BQ86YH2 543 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 FBXL6Q8N531 539 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 CNNM3Q8NE01 707 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 TNFRSF25Q93038 417 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 CCDC43Q96MW1 224 aaKnown RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 PRRX2Q99811 253 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
MRPL55-231ENST00000492170 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 CDH22Q9UJ99 828 aa17.09■□□□□ 0.33
MRPL55-231ENST00000492170 ZBTB39O15060 712 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 SLITRK3O94933 977 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
MRPL55-231ENST00000492170 AXLP30530 894 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 PTENP60484 403 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 NCBP1Q09161 790 aaKnown RBP17.08■□□□□ 0.32
MRPL55-231ENST00000492170 TRIM29Q14134 588 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 ME3Q16798 604 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 UBXN11Q5T124 520 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 CABP7Q86V35 215 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 UBN1Q9NPG3 1134 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
MRPL55-231ENST00000492170 ARID2Q68CP9 1835 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 C2CD4DB7Z1M9 353 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 B4GALT3O60512 393 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 NEMFO60524 1076 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 DGAT1O75907 488 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 DDHD2O94830 711 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 LYPLA2O95372 231 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 LARGE1O95461 756 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 POMCP01189 267 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ALDH2P05091 517 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ITGA4P13612 1032 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 EPCAMP16422 314 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 MRE11P49959 708 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 C12orf76Q8N812 135 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 NSUN7Q8NE18 718 aaKnown RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 SLC22A17Q8WUG5 538 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ANKEF1Q9NU02 776 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 DBR1Q9UK59 544 aaKnown RBP17.07■□□□□ 0.32
MRPL55-231ENST00000492170 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
MRPL55-231ENST00000492170 INO80B-WBP1J3KQ70 363 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 TSPAN1O60635 241 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 SEC24BO95487 1268 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
MRPL55-231ENST00000492170 FOSBP53539 338 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 PTPN5P54829 565 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-231ENST00000492170 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms