RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
COL6A3-211ENST00000491233 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.03
COL6A3-211ENST00000491233 KMT2EQ8IZD2 1858 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 CNTNAP2Q9UHC6 1331 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 CARNS1A5YM72 827 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 ASAP2O43150 1006 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 ERLIN2O94905 339 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 LYPLA2O95372 231 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 HOXB8P17481 243 aaPredicted RBP15.2■□□□□ 0.02
COL6A3-211ENST00000491233 HOXA11P31270 313 aaPredicted RBP15.2■□□□□ 0.02
COL6A3-211ENST00000491233 TXKP42681 527 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 BMS1Q14692 1282 aaKnown RBP15.2■□□□□ 0.02
COL6A3-211ENST00000491233 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 EDAQ92838 391 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 CDH22Q9UJ99 828 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 ZNF318Q5VUA4 2279 aa15.2■□□□□ 0.02
COL6A3-211ENST00000491233 POTEMA6NI47 508 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 TSPAN1O60635 241 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
COL6A3-211ENST00000491233 SEC24BO95487 1268 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 CXCL14O95715 111 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 CTSAP10619 480 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
COL6A3-211ENST00000491233 AFF1P51825 1210 aaKnown RBP15.19■□□□□ 0.02
COL6A3-211ENST00000491233 PTENP60484 403 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 GUCY1B3Q02153 619 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 TFDP1Q14186 410 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 MRPL10Q7Z7H8 261 aaKnown RBP15.19■□□□□ 0.02
COL6A3-211ENST00000491233 DDX53Q86TM3 631 aaKnown RBP15.19■□□□□ 0.02
COL6A3-211ENST00000491233 ZNF280BQ86YH2 543 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 ASAP3Q8TDY4 903 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 ANKEF1Q9NU02 776 aa15.19■□□□□ 0.02
COL6A3-211ENST00000491233 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 INO80B-WBP1J3KQ70 363 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 DGAT1O75907 488 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 DDHD2O94830 711 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 NCLP19338 710 aaKnown RBP15.18■□□□□ 0.02
COL6A3-211ENST00000491233 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 RARRES1P49788 294 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 CAPSQ13938 189 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 MXD4Q14582 209 aaPredicted RBP15.18■□□□□ 0.02
COL6A3-211ENST00000491233 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 SMG8Q8ND04 991 aaKnown RBP15.18■□□□□ 0.02
COL6A3-211ENST00000491233 CPB2Q96IY4 423 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 MTMR9Q96QG7 549 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
COL6A3-211ENST00000491233 IPPQ9Y573 584 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 IRAK3Q9Y616 596 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 C2orf16Q68DN1 1984 aa15.18■□□□□ 0.02
COL6A3-211ENST00000491233 TMEM221A6NGB7 291 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 M0R296 226 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 POMCP01189 267 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 ITGA4P13612 1032 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 EPCAMP16422 314 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 MCM7P33993 719 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 ARL2P36404 184 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 ZXDAP98168 799 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 MBTD1Q05BQ5 628 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 GIT2Q14161 759 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 SAFBQ15424 915 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 PTPN14Q15678 1187 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 CES5AQ6NT32 575 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 NOTUMQ6P988 496 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 TRIM67Q6ZTA4 783 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 CCDC83Q8IWF9 413 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 CNNM3Q8NE01 707 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 PIGOQ8TEQ8 1089 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 CCDC51Q96ER9 411 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 FAM193BQ96PV7 902 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 TMEM175Q9BSA9 504 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 POLR3FQ9H1D9 316 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-211ENST00000491233 ADAM7Q9H2U9 754 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 POMKQ9H5K3 350 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 DZANK1Q9NVP4 752 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
COL6A3-211ENST00000491233 MUC6Q6W4X9 2439 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 A0A087WWV3 80 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A3-211ENST00000491233 WEE2P0C1S8 567 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 GLRA2P23416 452 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 AXLP30530 894 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 MLH1P40692 756 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 ITIH3Q06033 890 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 PCBP1Q15365 356 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A3-211ENST00000491233 AMHR2Q16671 573 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 C12orf76Q8N812 135 aaPredicted RBP15.16■□□□□ 0.02
COL6A3-211ENST00000491233 SLC22A17Q8WUG5 538 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 NECTIN4Q96NY8 510 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 GAD1Q99259 594 aa15.16■□□□□ 0.02
COL6A3-211ENST00000491233 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms