RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 FPGT-TNNI3KV9GXZ4 949 aa5.58□□□□□ -1.52
CSTF1-205ENST00000490539 COL4A5P29400 1685 aa5.58□□□□□ -1.52
CSTF1-205ENST00000490539 CENPFP49454 3210 aa5.58□□□□□ -1.52
CSTF1-205ENST00000490539 CHD8Q9HCK8 2581 aa5.58□□□□□ -1.52
CSTF1-205ENST00000490539 SALL1Q9NSC2 1324 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 TEX51A0A1B0GUA7 166 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 ERC2O15083 957 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 SUSD5O60279 629 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
CSTF1-205ENST00000490539 MAP4K4O95819 1239 aaPredicted RBP5.57□□□□□ -1.52
CSTF1-205ENST00000490539 GLDCP23378 1020 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 PHKA1P46020 1223 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 HUNKP57058 714 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 MAP3K12Q12852 859 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 GRM1Q13255 1194 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 BICRALQ6AI39 1079 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 IQCEQ6IPM2 695 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 ZSCAN25Q6NSZ9 544 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 TTLL10Q6ZVT0 673 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 MXD3Q9BW11 206 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.57□□□□□ -1.52
CSTF1-205ENST00000490539 DEFB129Q9H1M3 183 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 GBA2Q9HCG7 927 aaPredicted RBP5.57□□□□□ -1.52
CSTF1-205ENST00000490539 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 APEX2Q9UBZ4 518 aa5.57□□□□□ -1.52
CSTF1-205ENST00000490539 IRS2Q9Y4H2 1338 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 SHTN1A0MZ66 631 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 CLRN2A0PK11 232 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 TRAF5O00463 557 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 NPHS1O60500 1241 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 IDH1O75874 414 aaKnown RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 ADORA1P30542 326 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 HOXC12P31275 282 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 SRSF3P84103 164 aaKnown RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 NOGQ13253 232 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 HDAC1Q13547 482 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 RASGRF1Q13972 1273 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 FKBP1CQ5VVH2 108 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 GTF2IRD2BQ6EKJ0 949 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 NAA16Q6N069 864 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 ATG14Q6ZNE5 492 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 GTF2IRD2Q86UP8 949 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 TRIM59Q8IWR1 403 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 CERS5Q8N5B7 392 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 USP33Q8TEY7 942 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 HNRNPLLQ8WVV9 542 aaKnown RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 CDCA5Q96FF9 252 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 CAPNS2Q96L46 248 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 PRMT6Q96LA8 375 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 CCDC8Q9H0W5 538 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 TDRD3Q9H7E2 651 aaKnown RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 IL1RAPL2Q9NP60 686 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 ZNF70Q9UC06 446 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 DBR1Q9UK59 544 aaKnown RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 COL1A1P02452 1464 aaPredicted RBP5.56□□□□□ -1.52
CSTF1-205ENST00000490539 COL4A1P02462 1669 aa5.56□□□□□ -1.52
CSTF1-205ENST00000490539 ZFHX4Q86UP3 3567 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 SCN9AQ15858 1988 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 NUDT19A8MXV4 375 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 TCP10L2B9ZVM9 353 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 ADM5C9JUS6 153 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 ETV2O00321 342 aaPredicted RBP5.55□□□□□ -1.52
CSTF1-205ENST00000490539 GJB6O95452 261 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 CPP00450 1065 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 CYBBP04839 570 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 PRDX5P30044 214 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 MAP2K2P36507 400 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 MECOMQ03112 1051 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 SCRN1Q12765 414 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 RASA3Q14644 834 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 DDR2Q16832 855 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 PAQR3Q6TCH7 311 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 SAPCD2Q86UD0 394 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 FAM83AQ86UY5 434 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 EAF2Q96CJ1 260 aaPredicted RBP5.55□□□□□ -1.52
CSTF1-205ENST00000490539 DNAJC2Q99543 621 aaKnown RBP5.55□□□□□ -1.52
CSTF1-205ENST00000490539 NKX2-4Q9H2Z4 354 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 DCTPP1Q9H773 170 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 ST7Q9NRC1 585 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 USP40Q9NVE5 1235 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 HMG20BQ9P0W2 317 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 DBNLQ9UJU6 430 aaKnown RBP5.55□□□□□ -1.52
CSTF1-205ENST00000490539 STXBP5LQ9Y2K9 1186 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 PSME4Q14997 1843 aa5.55□□□□□ -1.52
CSTF1-205ENST00000490539 B2RBV5 119 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 RFXAPO00287 272 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 ITGAVP06756 1048 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 SNRPB2P08579 225 aaKnown RBP5.54□□□□□ -1.52
CSTF1-205ENST00000490539 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 MED14OSP0DP75 135 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 MCAMP43121 646 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 BTDP43251 543 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 KCNJ6P48051 423 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 YBX1P67809 324 aaKnown RBP5.54□□□□□ -1.52
CSTF1-205ENST00000490539 DLG4P78352 724 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 MVKQ03426 396 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 SREBF2Q12772 1141 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms