RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PCDHGA12O60330 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 IL33O95760 270 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 CYBBP04839 570 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 RBP3P10745 1247 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 GPR3P46089 330 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 CT83Q5H943 113 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 ADGRF1Q5T601 910 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 FAM102BQ5T8I3 360 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PAQR3Q6TCH7 311 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 C7orf31Q8N865 590 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 TTC8Q8TAM2 541 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 ABHD4Q8TB40 342 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 SHISA4Q96DD7 197 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 CAPNS2Q96L46 248 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 LRGUKQ96M69 825 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 CHMP4AQ9BY43 222 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 SLC13A1Q9BZW2 595 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 SEMA4AQ9H3S1 761 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 POFUT1Q9H488 388 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 RC3H2Q9HBD1 1191 aaKnown RBP6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 TNFRSF12AQ9NP84 129 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 CCM2LQ9NUG4 571 aaPredicted RBP6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 DNAJC28Q9NX36 388 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 KCNG1Q9UIX4 513 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 EDARQ9UNE0 448 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 INVSQ9Y283 1065 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA9Q9Y5G4 932 aaKnown RBP6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA8Q9Y5G5 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA7Q9Y5G6 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA6Q9Y5G7 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 PCDHGA2Q9Y5H1 932 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 HCFC2Q9Y5Z7 792 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 AKAP11Q9UKA4 1901 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 TAF1LQ8IZX4 1826 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 COL5A2P05997 1499 aaPredicted RBP6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 SCN4AP35499 1836 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 NCOR1O75376 2440 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 MUC6Q6W4X9 2439 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 PRAMEF22A3QJZ6 481 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 HYAL3O43820 417 aaPredicted RBP6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 ADAMTS4O75173 837 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 WNT11O96014 354 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 PRR5P85299 388 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 GRM1Q13255 1194 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 SNX17Q15036 470 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 RAB3GAP1Q15042 981 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 EPHA7Q15375 998 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 PAN2Q504Q3 1202 aaKnown RBP6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 PRAMEF18Q5VWM3 479 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 CCDC62Q6P9F0 684 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 SLC4A10Q6U841 1118 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 TCEAL8Q8IYN2 117 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 CPA6Q8N4T0 437 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 ASB15Q8WXK1 588 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 QRSL1Q9H0R6 528 aaKnown RBP6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 ABT1Q9ULW3 272 aaKnown RBP6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 ANKRD6Q9Y2G4 727 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 PPLO60437 1756 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 E9PCH4 1651 aa6.23□□□□□ -1.41
SSX2IP-208ENST00000490476 CHD8Q9HCK8 2581 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 TOGARAM1Q9Y4F4 1720 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 SLIT3O75094 1523 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 UBA6A0AVT1 1052 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GOLGA6CA6NDK9 693 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GOLGA6BA6NDN3 693 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 KIAA1324LA8MWY0 1029 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 SRGAP3O43295 1099 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 MPOP05164 745 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GOLGA6DP0CG33 693 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 OSMP13725 252 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 SDHAP31040 664 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 PDE6BP35913 854 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GNALP38405 381 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 ECE1P42892 770 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 FNTBP49356 437 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 ADCY1Q08828 1119 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 TOR2AQ5JU69 321 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 ESPNLQ6ZVH7 1005 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 CXorf67Q86X51 503 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 MAGEB6Q8N7X4 407 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 FERMT2Q96AC1 680 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GOLGA6AQ9NYA3 693 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 ARHGAP28Q9P2N2 729 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 ZBTB21Q9ULJ3 1066 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 GIT1Q9Y2X7 761 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 KDM6AO15550 1401 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 UBR3Q6ZT12 1888 aa6.22□□□□□ -1.41
SSX2IP-208ENST00000490476 SCN11AQ9UI33 1791 aa6.21□□□□□ -1.41
SSX2IP-208ENST00000490476 PEX14O75381 377 aa6.21□□□□□ -1.42
SSX2IP-208ENST00000490476 RFPL1O75677 317 aa6.21□□□□□ -1.42
SSX2IP-208ENST00000490476 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms