RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 HECTD3Q5T447 861 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 ERICH6BQ5W0A0 696 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 TATDN1Q6P1N9 297 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 COL23A1Q86Y22 540 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 NRSN1Q8IZ57 195 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 USP38Q8NB14 1042 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 HIC2Q96JB3 615 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PKNOX2Q96KN3 472 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 RNF208Q9H0X6 261 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PRDM10Q9NQV6 1147 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SEMA3GQ9NS98 782 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 GIMAP2Q9UG22 337 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 INVSQ9Y283 1065 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 H3BM21 787 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 STT3AP46977 705 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 ICA1Q05084 483 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 TRIM25Q14258 630 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 FGL2Q14314 439 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 POSTNQ15063 836 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PFKFB4Q16877 469 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 FAM47CQ5HY64 1035 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 ZMYM1Q5SVZ6 1142 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 MAP3K21Q5TCX8 1036 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 RAB44Q7Z6P3 723 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 ADGRA1Q86SQ6 560 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 UBASH3BQ8TF42 649 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 MYLK2Q9H1R3 596 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 C2orf40Q9H1Z8 148 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 TP63Q9H3D4 680 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GHITMQ9H3K2 345 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 SENP2Q9HC62 589 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GPRC5CQ9NQ84 441 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 XPNPEP3Q9NQH7 507 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KLHL3Q9UH77 587 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 SAP30BPQ9UHR5 308 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GPR55Q9Y2T6 319 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 DTNAQ9Y4J8 743 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KIAA0556O60303 1618 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 SYNJ2O15056 1496 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 RAD54L2Q9Y4B4 1467 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 AGAP14A8MT82 685 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 C1QTNF9BB2RNN3 333 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 HIP1RO75146 1068 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GLI4P10075 376 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PEX2P28328 305 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KIR2DL1P43626 348 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KIR2DL2P43627 348 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 TLE1Q04724 770 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 TAF11Q15544 211 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 BCL6BQ8N143 479 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 MYCT1Q8N699 235 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.51□□□□□ -1.852e-6■■□□□ 12
UBXN4-208ENST00000490163 KATNAL1Q9BW62 490 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 EPB41L1Q9H4G0 881 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 STK17AQ9UEE5 414 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PRAMEF27A3QJZ7 478 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 ACOT7O00154 380 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PQBP1O60828 265 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 CUTAO60888 179 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 TMEM127O75204 238 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 CELA3BP08861 270 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PAMP19021 973 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 SLC5A2P31639 672 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 UBA7P41226 1012 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 MAP2K6P52564 334 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 SRSF2Q01130 221 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KRT76Q01546 638 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 UBE3CQ15386 1083 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 FAM180BQ6P0A1 224 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PGM2L1Q6PCE3 622 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PRPF39Q86UA1 669 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 WFDC3Q8IUB2 231 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 LILRA3Q8N6C8 439 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 ATP11CQ8NB49 1132 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GLB1L3Q8NCI6 653 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 OR2I1PQ8NGU4 316 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 RUBCNQ92622 972 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 AJUBAQ96IF1 538 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 PPP1R9BQ96SB3 815 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GAS2L1Q99501 681 aaPredicted RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 VPS11Q9H270 941 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GREM2Q9H772 168 aa3.51□□□□□ -1.85
UBXN4-208ENST00000490163 NOC2LQ9Y3T9 749 aaKnown RBP3.51□□□□□ -1.85
UBXN4-208ENST00000490163 GAPVD1Q14C86 1478 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 LRRN2O75325 713 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 CSF1P09603 554 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 CHKAP35790 457 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 FHL3Q13643 280 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 SLC14A2Q15849 920 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 FAM209BQ5JX69 171 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 ARL6IP4Q66PJ3 421 aaKnown RBP3.5□□□□□ -1.85
UBXN4-208ENST00000490163 JMJD6Q6NYC1 403 aaPredicted RBP3.5□□□□□ -1.85
UBXN4-208ENST00000490163 CHSY3Q70JA7 882 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 CXXC5Q7LFL8 322 aaKnown RBP3.5□□□□□ -1.85
UBXN4-208ENST00000490163 CDH24Q86UP0 819 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 TEX9Q8N6V9 391 aa3.5□□□□□ -1.85
UBXN4-208ENST00000490163 LSM14AQ8ND56 463 aaKnown RBP3.5□□□□□ -1.85
UBXN4-208ENST00000490163 GIMAP7Q8NHV1 300 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms