RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CEP170P1Q96L14 293 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 FAM20AQ96MK3 541 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 DHX33Q9H6R0 707 aaKnown RBP17.76■□□□□ 0.43
PLOD3-216ENST00000489927 BMP2KQ9NSY1 1161 aaPredicted RBP17.76■□□□□ 0.43
PLOD3-216ENST00000489927 CFAP54Q96N23 3096 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 GALR2O43603 387 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-216ENST00000489927 GFRA3O60609 400 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 DKC1O60832 514 aaKnown RBP eCLIP17.75■□□□□ 0.43
PLOD3-216ENST00000489927 SSBP05455 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
PLOD3-216ENST00000489927 P4HBP07237 508 aaKnown RBP17.75■□□□□ 0.43
PLOD3-216ENST00000489927 LAMTOR4Q0VGL1 99 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 UBXN11Q5T124 520 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 PPP4R3AQ6IN85 833 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 PPFIBP1Q86W92 1011 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 PSPC1Q8WXF1 523 aaKnown RBP17.75■□□□□ 0.43
PLOD3-216ENST00000489927 KLHL5Q96PQ7 755 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 PHF20Q9BVI0 1012 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 SFXN1Q9H9B4 322 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 RSAD1Q9HA92 442 aa17.75■□□□□ 0.43
PLOD3-216ENST00000489927 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 POMCP01189 267 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 CNPP09543 421 aaKnown RBP17.74■□□□□ 0.43
PLOD3-216ENST00000489927 CLCN4P51793 760 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 SRGAP1Q7Z6B7 1085 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 EXOC8Q8IYI6 725 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 HAS1Q92839 578 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 LXNQ9BS40 222 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 TMEM175Q9BSA9 504 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 PPME1Q9Y570 386 aa17.74■□□□□ 0.43
PLOD3-216ENST00000489927 CNTNAP2Q9UHC6 1331 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 ZFHX2Q9C0A1 2572 aaPredicted RBP17.73■□□□□ 0.43
PLOD3-216ENST00000489927 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 NRP1O14786 923 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
PLOD3-216ENST00000489927 CCNT1O60563 726 aaKnown RBP17.73■□□□□ 0.43
PLOD3-216ENST00000489927 LILRB3O75022 631 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 ALDH2P05091 517 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 KLRC2P26717 231 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 YWHABP31946 246 aaKnown RBP17.73■□□□□ 0.43
PLOD3-216ENST00000489927 RFC5P40937 340 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 C4orf19Q8IY42 314 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 RNF149Q8NC42 400 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 OXER1Q8TDS5 423 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 FAM193BQ96PV7 902 aaPredicted RBP17.73■□□□□ 0.43
PLOD3-216ENST00000489927 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 RGL1Q9NZL6 768 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 FAN1Q9Y2M0 1017 aa17.73■□□□□ 0.43
PLOD3-216ENST00000489927 CACNA1HO95180 2353 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 DENND4AQ7Z401 1863 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 ZBTB39O15060 712 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 DTNBO60941 627 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 GCFC2P16383 781 aaKnown RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 NCLP19338 710 aaKnown RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 SCRN1Q12765 414 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 EMC2Q15006 297 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 EPHA7Q15375 998 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 PIK3AP1Q6ZUJ8 805 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 CCDC149Q6ZUS6 474 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 ACSF2Q96CM8 615 aaPredicted RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
PLOD3-216ENST00000489927 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
PLOD3-216ENST00000489927 MYO10Q9HD67 2058 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 C2CD2LO14523 706 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 TBX3O15119 743 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 GAS2O43903 313 aaKnown RBP17.71■□□□□ 0.43
PLOD3-216ENST00000489927 MARCH6O60337 910 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 CDKL5O76039 1030 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 XKR9Q5GH70 373 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 OTOP3Q7RTS5 596 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
PLOD3-216ENST00000489927 IPPQ9Y573 584 aa17.71■□□□□ 0.43
PLOD3-216ENST00000489927 PROB1E7EW31 1015 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 ASAP2O43150 1006 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 TSPAN1O60635 241 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 ERLIN2O94905 339 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 SOD2P04179 222 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 ITGA4P13612 1032 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 CLCN5P51795 746 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
PLOD3-216ENST00000489927 EARS2Q5JPH6 523 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms