RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 IFNLR1Q8IU57 520 aaPredicted RBP22.85■■□□□ 1.25
SND1-214ENST00000489417 CBWD1Q9BRT8 395 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 FAM49AQ9H0Q0 323 aaPredicted RBP22.85■■□□□ 1.25
SND1-214ENST00000489417 PCIF1Q9H4Z3 704 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 METTL14Q9HCE5 456 aaKnown RBP22.85■■□□□ 1.25
SND1-214ENST00000489417 GTF2IRD1Q9UHL9 959 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 SCN10AQ9Y5Y9 1956 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 TEX33O43247 280 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 TREHO43280 583 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 EXOC3O60645 756 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 PRKCBP05771 671 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 ZNF200P98182 395 aaPredicted RBP22.84■■□□□ 1.25
SND1-214ENST00000489417 MAPK6Q16659 721 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 SLC9C1Q4G0N8 1177 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 VSTM4Q8IW00 320 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 TRIM59Q8IWR1 403 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 FAM186BQ8IYM0 893 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 TSEN34Q9BSV6 310 aaKnown RBP22.84■■□□□ 1.25
SND1-214ENST00000489417 UNC93B1Q9H1C4 597 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 HSPBP1Q9NZL4 362 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 ARMCX3Q9UH62 379 aaPredicted RBP22.84■■□□□ 1.25
SND1-214ENST00000489417 FRMD4BQ9Y2L6 1034 aa22.84■■□□□ 1.25
SND1-214ENST00000489417 FRMPD3Q5JV73 1810 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 A0A087WZ62 844 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 PES1O00541 588 aaKnown RBP22.83■■□□□ 1.25
SND1-214ENST00000489417 HSPA8P11142 646 aaKnown RBP22.83■■□□□ 1.25
SND1-214ENST00000489417 GARTP22102 1010 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 ADSSP30520 456 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 GPC3P51654 580 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 ACLYP53396 1101 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 CDC42EP1Q00587 391 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 VWA3BQ502W6 1294 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 MIIPQ5JXC2 388 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 TMC6Q7Z403 805 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 ZNF410Q86VK4 478 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 XXYLT1Q8NBI6 393 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 PPP1R16BQ96T49 567 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 FDXACB1Q9BRP7 624 aaPredicted RBP22.83■■□□□ 1.25
SND1-214ENST00000489417 MRPL4Q9BYD3 311 aaKnown RBP22.83■■□□□ 1.25
SND1-214ENST00000489417 IFT122Q9HBG6 1241 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 KAT6AQ92794 2004 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 EVPLQ92817 2033 aa22.83■■□□□ 1.25
SND1-214ENST00000489417 MOXD2PA6NHM9 499 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 INO80B-WBP1J3KQ70 363 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 EDN1P05305 212 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 PTMAP06454 111 aaKnown RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 NLRP11P59045 1033 aaKnown RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 MBTD1Q05BQ5 628 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 SESTD1Q86VW0 696 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 ARRDC4Q8NCT1 418 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 NLRP7Q8WX94 980 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 POMGNT1Q8WZA1 660 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 SCLT1Q96NL6 688 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 TARS2Q9BW92 718 aaKnown RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 INO80BQ9C086 356 aaPredicted RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 FZD8Q9H461 694 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 GOLGA6L6A8MZA4 724 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 PBX1P40424 430 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 UBXN1Q04323 297 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 PPP2R3AQ06190 1150 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 PTPN21Q16825 1174 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 FAM47CQ5HY64 1035 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 ZPBP2Q6X784 338 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 CTU1Q7Z7A3 348 aaKnown RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 DNAJB3Q8WWF6 145 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 NDST4Q9H3R1 872 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 MINDY3Q9H8M7 445 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 PRMT7Q9NVM4 692 aaPredicted RBP22.82■■□□□ 1.24
SND1-214ENST00000489417 USP20Q9Y2K6 914 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.82■■□□□ 1.24
SND1-214ENST00000489417 STYXL1Q9Y6J8 313 aa22.82■■□□□ 1.24
SND1-214ENST00000489417 GRIN2DO15399 1336 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 ACKR2O00590 384 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 SLFN12LQ6IEE8 588 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 GDF6Q6KF10 455 aaPredicted RBP22.81■■□□□ 1.24
SND1-214ENST00000489417 TAF2Q6P1X5 1199 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 BORCS6Q96GS4 357 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 ADAMTS10Q9H324 1103 aa22.81■■□□□ 1.24
SND1-214ENST00000489417 KIAA0391O15091 583 aaKnown RBP22.8■■□□□ 1.24
SND1-214ENST00000489417 MAPK13O15264 365 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 FAM187BQ17R55 369 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 FKBP15Q5T1M5 1219 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 SRGAP1Q7Z6B7 1085 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 NME8Q8N427 588 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 VTI1AQ96AJ9 217 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 ACO2Q99798 780 aaKnown RBP22.8■■□□□ 1.24
SND1-214ENST00000489417 PAK6Q9NQU5 681 aaPredicted RBP22.8■■□□□ 1.24
SND1-214ENST00000489417 IMPACTQ9P2X3 320 aa22.8■■□□□ 1.24
SND1-214ENST00000489417 GOLGA8IPA6NC78 632 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 GOLGA8JA6NMD2 632 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 GPR32O75388 356 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 CCL5P13501 91 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 TMEM62Q0P6H9 643 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 PRPF4BQ13523 1007 aaKnown RBP22.79■■□□□ 1.24
SND1-214ENST00000489417 ITGA7Q13683 1181 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 MTFR1Q15390 333 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 KIZQ2M2Z5 673 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 SPECC1LQ69YQ0 1117 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 RDH13Q8NBN7 331 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 ZSWIM2Q8NEG5 633 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms