RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 C17orf75Q9HAS0 396 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 HMX1Q9NP08 348 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 JADE2Q9NQC1 790 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 FAM53CQ9NYF3 392 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 RNF14Q9UBS8 474 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF214Q9UL59 606 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TRIM17Q9Y577 477 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 HTTP42858 3142 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 LRRC53A6NM62 1247 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 AKR1B10O60218 316 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 FLOT1O75955 427 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 GCNT3O95395 438 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 NR3C1P04150 777 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC172P0C7W6 258 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 TCP1P17987 556 aaKnown RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PSMC2P35998 433 aaKnown RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PSMC4P43686 418 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PSMC6P62333 389 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 CYP4A11Q02928 519 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 TMEM132BQ14DG7 1078 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 FBXO46Q6PJ61 603 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 GBP6Q6ZN66 633 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 RRAGAQ7L523 313 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF720Q7Z2F6 126 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF572Q7Z3I7 529 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 TPH2Q8IWU9 490 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 FAM178BQ8IXR5 827 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 C4orf19Q8IY42 314 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 KRT222Q8N1A0 295 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 SHCBP1Q8NEM2 672 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 CYP2W1Q8TAV3 490 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 GJA10Q969M2 543 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 DRC1Q96MC2 740 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 STRA6Q9BX79 667 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PORCNQ9H237 461 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ZHX3Q9H4I2 956 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 EFCC1Q9HA90 598 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 AGO4Q9HCK5 861 aaKnown RBP9.24□□□□□ -0.93
VTI1A-207ENST00000489357 KCNH7Q9NS40 1196 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ANKEF1Q9NU02 776 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ARHGAP20Q9P2F6 1191 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 SRRDQ9UH36 339 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 RAB21Q9UL25 225 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 GUCA1BQ9UMX6 200 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PTPN22Q9Y2R2 807 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PCDHA13Q9Y5I0 950 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 SAR1BQ9Y6B6 198 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 ASTN1O14525 1302 aa9.24□□□□□ -0.93
VTI1A-207ENST00000489357 PLXNA1Q9UIW2 1896 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 TARSL2A2RTX5 802 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ARHGEF35A5YM69 484 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 PMM2O15305 246 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 P4HA2O15460 535 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 DHX15O43143 795 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ZBTB24O43167 697 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 N4BP1O75113 896 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ZRANB2O95218 330 aaKnown RBP eCLIP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ITGB5P18084 799 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 HOXD13P35453 343 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 PRKCIP41743 596 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 QARSP47897 775 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 IRF5Q13568 498 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 MTMR1Q13613 665 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 NR6A1Q15406 480 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 SLC18A3Q16572 532 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 IFI16Q16666 785 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 EXOC3L4Q17RC7 722 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF746Q6NUN9 644 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 WDR93Q6P2C0 686 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 MIER3Q7Z3K6 550 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 VPS36Q86VN1 386 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 RIOX2Q8IUF8 465 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 NELFCDQ8IXH7 590 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 SMAP1Q8IYB5 467 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 MYCT1Q8N699 235 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 GLIS3Q8NEA6 775 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 SYTL5Q8TDW5 730 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 KCNN1Q92952 543 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 LXNQ9BS40 222 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 RUSC1Q9BVN2 902 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 MOV10L1Q9BXT6 1211 aaKnown RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-207ENST00000489357 SPATC1LQ9H0A9 340 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 GANQ9H2C0 597 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 UNC45AQ9H3U1 944 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 DMAC2Q9NW81 257 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 RGL1Q9NZL6 768 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 INTUQ9ULD6 942 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms