RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SMRP1Q8NCR6 262 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 POLR3CQ9BUI4 534 aaPredicted RBP25.57■■□□□ 1.68
COL9A3-213ENST00000489045 NRDE2Q9H7Z3 1164 aa25.57■■□□□ 1.68
COL9A3-213ENST00000489045 NGRNQ9NPE2 291 aaKnown RBP25.57■■□□□ 1.68
COL9A3-213ENST00000489045 NOL7Q9UMY1 257 aaKnown RBP25.57■■□□□ 1.68
COL9A3-213ENST00000489045 ST18O60284 1047 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 RNASELQ05823 741 aaKnown RBP25.56■■□□□ 1.68
COL9A3-213ENST00000489045 MBTD1Q05BQ5 628 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 POU5F1BQ06416 359 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 POTEGQ6S5H5 508 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 TMEM173Q86WV6 379 aaPredicted RBP25.56■■□□□ 1.68
COL9A3-213ENST00000489045 ERMNQ8TAM6 284 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 TMEM169Q96HH4 297 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 CPB2Q96IY4 423 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 RSAD1Q9HA92 442 aa25.56■■□□□ 1.68
COL9A3-213ENST00000489045 DBR1Q9UK59 544 aaKnown RBP25.56■■□□□ 1.68
COL9A3-213ENST00000489045 TDRD15B5MCY1 1934 aaKnown RBP25.56■■□□□ 1.68
COL9A3-213ENST00000489045 C19orf67A6NJJ6 358 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 PI4K2BG5E9Z4 385 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 COL9A1P20849 921 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 U2AF2P26368 475 aaKnown RBP eCLIP25.55■■□□□ 1.684e-6■■■■□ 23.7
COL9A3-213ENST00000489045 AXLP30530 894 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 MAEAQ7L5Y9 396 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 URGCPQ8TCY9 931 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 NACC1Q96RE7 527 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 GBP3Q9H0R5 595 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 GPRC5CQ9NQ84 441 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 DNAJB4Q9UDY4 337 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 CNTNAP2Q9UHC6 1331 aa25.55■■□□□ 1.68
COL9A3-213ENST00000489045 B4GALT3O60512 393 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 NCLP19338 710 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 RPA1P27694 616 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 SMC1AQ14683 1233 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 AMHR2Q16671 573 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 NOTUMQ6P988 496 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 C4orf32Q8N8J7 132 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 SMG8Q8ND04 991 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 CCDC51Q96ER9 411 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 POP1Q99575 1024 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 EIF2AQ9BY44 585 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 NFKBIZQ9BYH8 718 aa25.54■■□□□ 1.68
COL9A3-213ENST00000489045 UPF2Q9HAU5 1272 aaKnown RBP25.54■■□□□ 1.68
COL9A3-213ENST00000489045 CARNS1A5YM72 827 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 GALTP07902 379 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 AFF1P51825 1210 aaKnown RBP25.53■■□□□ 1.68
COL9A3-213ENST00000489045 NCBP1Q09161 790 aaKnown RBP25.53■■□□□ 1.68
COL9A3-213ENST00000489045 KCNC3Q14003 757 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 LLGL2Q6P1M3 1020 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 ZNF280BQ86YH2 543 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 CNNM3Q8NE01 707 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 MCPH1Q8NEM0 835 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 BCL7CQ8WUZ0 217 aaPredicted RBP25.53■■□□□ 1.68
COL9A3-213ENST00000489045 IGSF21Q96ID5 467 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 USP15Q9Y4E8 981 aaPredicted RBP25.53■■□□□ 1.68
COL9A3-213ENST00000489045 IPPQ9Y573 584 aa25.53■■□□□ 1.68
COL9A3-213ENST00000489045 C2orf71A6NGG8 1288 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 SRGAP2BP0DMP2 458 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 ITGA4P13612 1032 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 CA8P35219 290 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 SLC11A1P49279 550 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 TOB1P50616 345 aaPredicted RBP25.52■■□□□ 1.68
COL9A3-213ENST00000489045 FXR2P51116 673 aaKnown RBP eCLIP25.52■■□□□ 1.68
COL9A3-213ENST00000489045 HAUS3Q68CZ6 603 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 TMX3Q96JJ7 454 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 CSRNP2Q9H175 543 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 KIF3AQ9Y496 699 aa25.52■■□□□ 1.68
COL9A3-213ENST00000489045 LRRIQ4A6NIV6 560 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 B4GALT5O43286 388 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 DDHD2O94830 711 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 CD2BP2O95400 341 aaKnown RBP25.51■■□□□ 1.67
COL9A3-213ENST00000489045 ARF4P18085 180 aaPredicted RBP25.51■■□□□ 1.67
COL9A3-213ENST00000489045 TMEM31Q5JXX7 168 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 TMEM184AQ6ZMB5 413 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 VPS52Q8N1B4 723 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 MRPL43Q8N983 215 aaKnown RBP25.51■■□□□ 1.67
COL9A3-213ENST00000489045 LRFN3Q9BTN0 628 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 ZBP1Q9H171 429 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 C11orf16Q9NQ32 467 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 PCDHB6Q9Y5E3 794 aa25.51■■□□□ 1.67
COL9A3-213ENST00000489045 ARHGEF35A5YM69 484 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 FAM86C2PA6NEL3 165 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 POMCP01189 267 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 CCT6AP40227 531 aaKnown RBP25.5■■□□□ 1.67
COL9A3-213ENST00000489045 PTGDRQ13258 359 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 ANKRD54Q6NXT1 300 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 DDX53Q86TM3 631 aaKnown RBP25.5■■□□□ 1.67
COL9A3-213ENST00000489045 RNF39Q9H2S5 420 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 UBN1Q9NPG3 1134 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 KANSL3Q9P2N6 904 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 LRWD1Q9UFC0 647 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 RAPGEFL1Q9UHV5 662 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 HES2Q9Y543 173 aa25.5■■□□□ 1.67
COL9A3-213ENST00000489045 CXCL14O95715 111 aa25.49■■□□□ 1.67
COL9A3-213ENST00000489045 MUTP22033 750 aa25.49■■□□□ 1.67
COL9A3-213ENST00000489045 BMS1Q14692 1282 aaKnown RBP25.49■■□□□ 1.67
COL9A3-213ENST00000489045 ECM1Q16610 540 aa25.49■■□□□ 1.67
COL9A3-213ENST00000489045 PADI6Q6TGC4 694 aa25.49■■□□□ 1.67
COL9A3-213ENST00000489045 CDR2LQ86X02 465 aaPredicted RBP25.49■■□□□ 1.67
COL9A3-213ENST00000489045 AUTS2Q8WXX7 1259 aa25.49■■□□□ 1.67
COL9A3-213ENST00000489045 FAM193BQ96PV7 902 aaPredicted RBP25.49■■□□□ 1.67
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