RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 UBXN11Q5T124 520 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 NT5DC1Q5TFE4 455 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 PAGE5Q96GU1 130 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 PRIMPOLQ96LW4 560 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 FIZ1Q96SL8 496 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 RAD9AQ99638 391 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 ZBED2Q9BTP6 218 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 TRAIPQ9BWF2 469 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 MAGEF1Q9HAY2 307 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
FDPS-213ENST00000489003 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 TLL1O43897 1013 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 TRAK2O60296 914 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 ZNF202O95125 648 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 IBSPP21815 317 aaPredicted RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 CASP1P29466 404 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 AFMP43652 599 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 HTRA4P83105 476 aaPredicted RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 TWF2Q6IBS0 349 aaKnown RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 NPAS4Q8IUM7 802 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
FDPS-213ENST00000489003 LRFN2Q9ULH4 789 aa16.7■□□□□ 0.26
FDPS-213ENST00000489003 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 ZNF623O75123 536 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 DGKIO75912 1065 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 EOMESO95936 686 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
FDPS-213ENST00000489003 IDEP14735 1019 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
FDPS-213ENST00000489003 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
FDPS-213ENST00000489003 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
FDPS-213ENST00000489003 CUL4BQ13620 913 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 RAB30Q15771 203 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 MRPL10Q7Z7H8 261 aaKnown RBP16.69■□□□□ 0.26
FDPS-213ENST00000489003 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 KCNN1Q92952 543 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 NKX2-4Q9H2Z4 354 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 MSRAQ9UJ68 235 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 INSL6Q9Y581 213 aa16.69■□□□□ 0.26
FDPS-213ENST00000489003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 GAP43P17677 238 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 SNW1Q13573 536 aaKnown RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 SFR1Q86XK3 245 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 FMR1NBQ8N0W7 255 aaPredicted RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 ZNF689Q96CS4 500 aaPredicted RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
FDPS-213ENST00000489003 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 PHLPP2Q6ZVD8 1323 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 CNTNAP2Q9UHC6 1331 aa16.68■□□□□ 0.26
FDPS-213ENST00000489003 H0YCG3 227 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 SKIP12755 728 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 DNAJB2P25686 324 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 GATMP50440 423 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 ASIC1P78348 528 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 GTF2BQ00403 316 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 SMG8Q8ND04 991 aaKnown RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 LPPQ93052 612 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 TARS2Q9BW92 718 aaKnown RBP16.67■□□□□ 0.26
FDPS-213ENST00000489003 STRA6Q9BX79 667 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 PDZD7Q9H5P4 517 aa16.67■□□□□ 0.26
FDPS-213ENST00000489003 RC3H2Q9HBD1 1191 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms