RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CA8P35219 290 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 CAPSQ13938 189 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 NBR1Q14596 966 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 TTC38Q5R3I4 469 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 TMEM173Q86WV6 379 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 ZNF280BQ86YH2 543 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 MRPL43Q8N983 215 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 SMRP1Q8NCR6 262 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 CPB2Q96IY4 423 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 POLR3FQ9H1D9 316 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 GPRC5CQ9NQ84 441 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 DNAJB4Q9UDY4 337 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 USP15Q9Y4E8 981 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 B4GALT3O60512 393 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 POMCP01189 267 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 ALADP13716 330 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 SLC11A1P49279 550 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 NCBP1Q09161 790 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 KCNC3Q14003 757 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 VPS52Q8N1B4 723 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 SMG8Q8ND04 991 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 BCL7CQ8WUZ0 217 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 IGSF21Q96ID5 467 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 NACC1Q96RE7 527 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 APOL5Q9BWW9 433 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 EIF2AQ9BY44 585 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 RSAD1Q9HA92 442 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 HES2Q9Y543 173 aa13.26□□□□□ -0.29
CCHCR1-215ENST00000488920 ATG2AQ2TAZ0 1938 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 C5orf42Q9H799 3197 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 DCXO43602 365 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 GPR37L1O60883 481 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 DDHD2O94830 711 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 ITGA4P13612 1032 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 NCLP19338 710 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 RPA1P27694 616 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 AXLP30530 894 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 ORC2Q13416 577 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 RABEP1Q15276 862 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 AMHR2Q16671 573 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 TMEM184AQ6ZMB5 413 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 DDX53Q86TM3 631 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 ERMNQ8TAM6 284 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 FAM193BQ96PV7 902 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 CSRNP2Q9H175 543 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 KANSL3Q9P2N6 904 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 IPPQ9Y573 584 aa13.25□□□□□ -0.29
CCHCR1-215ENST00000488920 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 B4GALT5O43286 388 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 CLASP2O75122 1294 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 ALDH2P05091 517 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 SRGAP2BP0DMP2 458 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 RNF135Q8IUD6 432 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 GAD1Q99259 594 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 S1PR5Q9H228 398 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
CCHCR1-215ENST00000488920 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ARL5CA6NH57 179 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ST18O60284 1047 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 CTSAP10619 480 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms