RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 C2CD4DB7Z1M9 353 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 EPCAMP16422 314 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 MTHFRP42898 656 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 PTPN5P54829 565 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 RARS2Q5T160 578 aaKnown RBP20.58■□□□□ 0.89
HDAC6-231ENST00000488905 KIAA1841Q6NSI8 718 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 AGMOQ6ZNB7 445 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 RIPOR3Q96MK2 946 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 VN1R3Q9BXE9 311 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 CNTNAP2Q9UHC6 1331 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 MARCH6O60337 910 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 DTNBO60941 627 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 SRGAP2CP0DJJ0 459 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 PTPN14Q15678 1187 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 EARS2Q5JPH6 523 aaKnown RBP20.57■□□□□ 0.88
HDAC6-231ENST00000488905 MRPL10Q7Z7H8 261 aaKnown RBP20.57■□□□□ 0.88
HDAC6-231ENST00000488905 ZNF280BQ86YH2 543 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 SLFN12Q8IYM2 578 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 KREMEN2Q8NCW0 462 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 TCP11Q8WWU5 503 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 DYDC2Q96IM9 177 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 CFAP54Q96N23 3096 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 RGL1Q9NZL6 768 aa20.57■□□□□ 0.88
HDAC6-231ENST00000488905 FAM205CA6NFA0 338 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 CTDNEP1O95476 244 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 WEE2P0C1S8 567 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 HOXA11P31270 313 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-231ENST00000488905 VCPP55072 806 aaKnown RBP20.56■□□□□ 0.88
HDAC6-231ENST00000488905 CYP4A11Q02928 519 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 MTMR3Q13615 1198 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 OTUD6AQ7L8S5 288 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 FERMT3Q86UX7 667 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 C12orf76Q8N812 135 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-231ENST00000488905 RNF149Q8NC42 400 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 MTRQ99707 1265 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 ZSWIM4Q9H7M6 989 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 ORC3Q9UBD5 711 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-231ENST00000488905 STK39Q9UEW8 545 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 SORCS3Q9UPU3 1222 aa20.56■□□□□ 0.88
HDAC6-231ENST00000488905 DDHD2O94830 711 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
HDAC6-231ENST00000488905 TCF15Q12870 199 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 NR5A1Q13285 461 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 CTTNQ14247 550 aaKnown RBP20.55■□□□□ 0.88
HDAC6-231ENST00000488905 XKR9Q5GH70 373 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 TDRD5Q8NAT2 981 aaKnown RBP20.55■□□□□ 0.88
HDAC6-231ENST00000488905 SLC22A17Q8WUG5 538 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 WASF1Q92558 559 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 PHOX2BQ99453 314 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 TMEM175Q9BSA9 504 aa20.55■□□□□ 0.88
HDAC6-231ENST00000488905 ASAP2O43150 1006 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 ERLIN2O94905 339 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 BAG4O95429 457 aaKnown RBP20.54■□□□□ 0.88
HDAC6-231ENST00000488905 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
HDAC6-231ENST00000488905 KRT2P35908 639 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 ANKRD1Q15327 319 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 KANK3Q6NY19 840 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 CABP7Q86V35 215 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 PPFIBP1Q86W92 1011 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 UBALD2Q8IYN6 164 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 TNFRSF25Q93038 417 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 FAM193BQ96PV7 902 aaPredicted RBP20.54■□□□□ 0.88
HDAC6-231ENST00000488905 SFXN1Q9H9B4 322 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 BRMS1Q9HCU9 246 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 XPNPEP1Q9NQW7 623 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 KANSL3Q9P2N6 904 aa20.54■□□□□ 0.88
HDAC6-231ENST00000488905 DBR1Q9UK59 544 aaKnown RBP20.54■□□□□ 0.88
HDAC6-231ENST00000488905 MTCL1Q9Y4B5 1905 aaKnown RBP20.54■□□□□ 0.88
HDAC6-231ENST00000488905 ZBTB39O15060 712 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 TSPAN1O60635 241 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 BRD1O95696 1058 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 POMCP01189 267 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 AK2P54819 239 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 ANAPC15P60006 121 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 PCBP1Q15365 356 aaKnown RBP eCLIP20.53■□□□□ 0.88
HDAC6-231ENST00000488905 ATAT1Q5SQI0 421 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 TPH2Q8IWU9 490 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 SMG8Q8ND04 991 aaKnown RBP20.53■□□□□ 0.88
HDAC6-231ENST00000488905 EMILIN2Q9BXX0 1053 aa20.53■□□□□ 0.88
HDAC6-231ENST00000488905 PDGFBP01127 241 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-231ENST00000488905 SSBP05455 408 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC6-231ENST00000488905 FDPSP14324 419 aaKnown RBP20.52■□□□□ 0.88
HDAC6-231ENST00000488905 AVPR2P30518 371 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 PTENP60484 403 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 MXD4Q14582 209 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-231ENST00000488905 NOTUMQ6P988 496 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 TMC5Q6UXY8 1006 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 ZDHHC14Q8IZN3 488 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 CNNM3Q8NE01 707 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 CCDC51Q96ER9 411 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 EIF2AK1Q9BQI3 630 aaKnown RBP20.52■□□□□ 0.88
HDAC6-231ENST00000488905 UBN1Q9NPG3 1134 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 USTQ9Y2C2 406 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 FAN1Q9Y2M0 1017 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 IPPQ9Y573 584 aa20.52■□□□□ 0.88
HDAC6-231ENST00000488905 DOCK8Q8NF50 2099 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms