RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 WEE2P0C1S8 567 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 AOC1P19801 751 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
TTC3-221ENST00000488522 PSMC5P62195 406 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 CYP26C1Q6V0L0 522 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 CCDC149Q6ZUS6 474 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 RNF168Q8IYW5 571 aaPredicted RBP13.75□□□□□ -0.21
TTC3-221ENST00000488522 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 GJA10Q969M2 543 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 ACSF2Q96CM8 615 aaPredicted RBP13.75□□□□□ -0.21
TTC3-221ENST00000488522 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 LIMD1Q9UGP4 676 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 DUSP12Q9UNI6 340 aa13.75□□□□□ -0.21
TTC3-221ENST00000488522 C1RP00736 705 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 NPR3P17342 541 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 NLRP5P59047 1200 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 ANAPC15P60006 121 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 PPP2R5CQ13362 524 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 TDGQ13569 410 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 ZNF280BQ86YH2 543 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 RHPN2Q8IUC4 686 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 EMILIN2Q9BXX0 1053 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
TTC3-221ENST00000488522 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 DOCK8Q8NF50 2099 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 EP300Q09472 2414 aaPredicted RBP13.74□□□□□ -0.21
TTC3-221ENST00000488522 ARID2Q68CP9 1835 aa13.74□□□□□ -0.21
TTC3-221ENST00000488522 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
TTC3-221ENST00000488522 DDHD2O94830 711 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 SOD2P04179 222 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 CNPP09543 421 aaKnown RBP13.73□□□□□ -0.21
TTC3-221ENST00000488522 PSMA5P28066 241 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
TTC3-221ENST00000488522 CA8P35219 290 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
TTC3-221ENST00000488522 PCBP1Q15365 356 aaKnown RBP eCLIP13.73□□□□□ -0.21
TTC3-221ENST00000488522 UBXN11Q5T124 520 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 EXOC8Q8IYI6 725 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 CCDC105Q8IYK2 499 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 TMEM87AQ8NBN3 555 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
TTC3-221ENST00000488522 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 EML1O00423 815 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
TTC3-221ENST00000488522 DEXIO95424 95 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
TTC3-221ENST00000488522 RFC5P40937 340 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
TTC3-221ENST00000488522 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
TTC3-221ENST00000488522 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 TRIM22Q8IYM9 498 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 RTP3Q9BQQ7 232 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 SH2D3AQ9BRG2 576 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 MFSD1Q9H3U5 465 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 MINDY3Q9H8M7 445 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 KCNK12Q9HB15 430 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
TTC3-221ENST00000488522 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
TTC3-221ENST00000488522 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 MTCL1Q9Y4B5 1905 aaKnown RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 NRP1O14786 923 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 SLC37A4O43826 429 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 ALDH2P05091 517 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 KLRC2P26717 231 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 DSC1Q08554 894 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 NONOQ15233 471 aaKnown RBP eCLIP13.71□□□□□ -0.21
TTC3-221ENST00000488522 LONRF3Q496Y0 759 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 PLA2G4FQ68DD2 849 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 C4orf19Q8IY42 314 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 PSPC1Q8WXF1 523 aaKnown RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms