RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF318Q5VUA4 2279 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 DCXO43602 365 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 GAS2O43903 313 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 B4GALT3O60512 393 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 ZNF623O75123 536 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 MED24O75448 989 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 DGAT1O75907 488 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 LYPLA2O95372 231 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 EYA4O95677 639 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 CXCL14O95715 111 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 POMCP01189 267 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 GALTP07902 379 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 SPATA31C1P0DKV0 1188 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 SP100P23497 879 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 PTENP60484 403 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 COASYQ13057 564 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 CAPSQ13938 189 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 VPS52Q8N1B4 723 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 CDCA3Q99618 268 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 LLPHQ9BRT6 129 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 EIF2AQ9BY44 585 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 POLR3FQ9H1D9 316 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 POLD4Q9HCU8 107 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 GPRC5CQ9NQ84 441 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 MUTYHQ9UIF7 546 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 CDH22Q9UJ99 828 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 HES2Q9Y543 173 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 MUC6Q6W4X9 2439 aa12.57□□□□□ -0.4
NIPAL3-207ENST00000488155 C2orf71A6NGG8 1288 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 TSPAN1O60635 241 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 GPR37L1O60883 481 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 DDHD2O94830 711 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 OR52Z1P0C646 297 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 ITGA4P13612 1032 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 ALADP13716 330 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 GLRA2P23416 452 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 ARL2P36404 184 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 SLC11A1P49279 550 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 TFDP1Q14186 410 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 MRPL10Q7Z7H8 261 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 CATSPER3Q86XQ3 398 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 SMG8Q8ND04 991 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 FBXO18Q8NFZ0 1043 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 URGCPQ8TCY9 931 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 IGSF21Q96ID5 467 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 POP1Q99575 1024 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
NIPAL3-207ENST00000488155 ZDBF2Q9HCK1 2354 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 B4GALT5O43286 388 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 CLASP2O75122 1294 aaKnown RBP12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 SRGAP2BP0DMP2 458 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 ARF4P18085 180 aaPredicted RBP12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 LIG1P18858 919 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 MRPL43Q8N983 215 aaKnown RBP12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 GAD1Q99259 594 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 TUFT1Q9NNX1 390 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 MIOSQ9NXC5 875 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 IPPQ9Y573 584 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 HCFC2Q9Y5Z7 792 aa12.55□□□□□ -0.4
NIPAL3-207ENST00000488155 VWA8A3KMH1 1905 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 DOCK8Q8NF50 2099 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NPTXRO95502 500 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 AKAP5P24588 427 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 MLH1P40692 756 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 KCNC3Q14003 757 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 AMHR2Q16671 573 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 C12orf76Q8N812 135 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 ERMNQ8TAM6 284 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1074.1 ms