RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
VPS16-208ENST00000487461 ZBP1Q9H171 429 aa13.62□□□□□ -0.23
VPS16-208ENST00000487461 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
VPS16-208ENST00000487461 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
VPS16-208ENST00000487461 WNT7AO00755 349 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 JAK2O60674 1132 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 CTSAP10619 480 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 BMS1Q14692 1282 aaKnown RBP13.61□□□□□ -0.23
VPS16-208ENST00000487461 TPRNQ4KMQ1 711 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 KANK3Q6NY19 840 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 SLC22A17Q8WUG5 538 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 PBXIP1Q96AQ6 731 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 MTRQ99707 1265 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 ADAM7Q9H2U9 754 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 IRAK3Q9Y616 596 aa13.61□□□□□ -0.23
VPS16-208ENST00000487461 A0A087WWV3 80 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 CARNS1A5YM72 827 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 GAS2O43903 313 aaKnown RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 LYPLA2O95372 231 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 ALDH2P05091 517 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 NEK4P51957 841 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 FOSBP53539 338 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 CALCRLQ16602 461 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 SMG8Q8ND04 991 aaKnown RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 MTMR9Q96QG7 549 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 KCNH6Q9H252 994 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
VPS16-208ENST00000487461 RSAD1Q9HA92 442 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 TRIOO75962 3097 aa13.6□□□□□ -0.23
VPS16-208ENST00000487461 SEC24BO95487 1268 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 POMCP01189 267 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 EPCAMP16422 314 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
VPS16-208ENST00000487461 TXKP42681 527 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 PTENP60484 403 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 NHLH1Q02575 133 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ITIH3Q06033 890 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 MXD4Q14582 209 aaPredicted RBP13.59□□□□□ -0.23
VPS16-208ENST00000487461 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 RARS2Q5T160 578 aaKnown RBP13.59□□□□□ -0.23
VPS16-208ENST00000487461 CES5AQ6NT32 575 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ALYREFQ86V81 257 aaKnown RBP13.59□□□□□ -0.23
VPS16-208ENST00000487461 DIS3L2Q8IYB7 885 aaKnown RBP13.59□□□□□ -0.23
VPS16-208ENST00000487461 TMEM87AQ8NBN3 555 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 FEZF2Q8TBJ5 459 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 TMEM175Q9BSA9 504 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ANKEF1Q9NU02 776 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 ZNF318Q5VUA4 2279 aa13.59□□□□□ -0.23
VPS16-208ENST00000487461 C2CD4DB7Z1M9 353 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 NRP1O14786 923 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 TSPAN1O60635 241 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 LILRB3O75022 631 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 ERLIN2O94905 339 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 ITGA4P13612 1032 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 ARL2P36404 184 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 POU5F1BQ06416 359 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 SIGLEC14Q08ET2 396 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 GIT2Q14161 759 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 PTPN14Q15678 1187 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 AMHR2Q16671 573 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 IER5LQ5T953 404 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
VPS16-208ENST00000487461 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 ASIC4Q96FT7 647 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
VPS16-208ENST00000487461 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 HES2Q9Y543 173 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 IPPQ9Y573 584 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 PIEZO1Q92508 2521 aa13.58□□□□□ -0.24
VPS16-208ENST00000487461 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 NEMFO60524 1076 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 DGAT1O75907 488 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 SSBP05455 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
VPS16-208ENST00000487461 SPATA31C1P0DKV0 1188 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 XRCC6P12956 609 aaKnown RBP eCLIP13.57□□□□□ -0.24
VPS16-208ENST00000487461 GLRA2P23416 452 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 AXLP30530 894 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 MTHFRP42898 656 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 RARRES1P49788 294 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms