RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TBX21Q9UL17 535 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 KCNH3Q9ULD8 1083 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 DNAJC25-GNG10A0A024R161 153 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 A0A1W2PQ45 241 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 A0A1W2PQY0 241 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 TCRBV5S4A2TA0A5A2 114 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ATP2A1O14983 1001 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ELP1O95163 1332 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 TIMP1P01033 207 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 AKR1A1P14550 325 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 RAG1P15918 1043 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 CST5P28325 142 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 POLR2BP30876 1174 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 CDK7P50613 346 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 TMEM132BQ14DG7 1078 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 PRAMEF19Q5SWL8 479 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 TMEM57Q8N5G2 664 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 REPS2Q8NFH8 660 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 RNPC3Q96LT9 517 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ASPNQ9BXN1 380 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 CRNKL1Q9BZJ0 848 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 TANGO6Q9C0B7 1094 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ATP8A2Q9NTI2 1148 aa6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ZNFX1Q9P2E3 1918 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 ZNF214Q9UL59 606 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-218ENST00000487294 NAV1Q8NEY1 1877 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 MROH7Q68CQ1 1323 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 VWA5AO00534 786 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 DUSP11O75319 330 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 BCAR3O75815 825 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 FLOT1O75955 427 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 PDE6AP16499 860 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 TPP2P29144 1249 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 STAT3P40763 770 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 ACLYP53396 1101 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 FPGSQ05932 587 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 OS9Q13438 667 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 GAB4Q2WGN9 574 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 SLC9C2Q5TAH2 1124 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 C12orf60Q5U649 245 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 ANO1Q5XXA6 986 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 ZKSCAN2Q63HK3 967 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 CCDC174Q6PII3 467 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 C16orf59Q7L2K0 433 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 NLRC3Q7RTR2 1065 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 ERC1Q8IUD2 1116 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 USP38Q8NB14 1042 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 SLC44A5Q8NCS7 719 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 NUP133Q8WUM0 1156 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 FERMT2Q96AC1 680 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 FAM84AQ96KN4 292 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 CCDC8Q9H0W5 538 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 TRIT1Q9H3H1 467 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 KANSL2Q9H9L4 492 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 MCM9Q9NXL9 1143 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 TNNQ9UQP3 1299 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 CHD7Q9P2D1 2997 aa6.11□□□□□ -1.43
R3HDM1-218ENST00000487294 ZBED9Q6R2W3 1325 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 ZNF532Q9HCE3 1301 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 SYNRGQ9UMZ2 1314 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 GREB1LQ9C091 1923 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 CCER2I3L3R5 266 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 SNAI1O95863 264 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 PGK1P00558 417 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 NME1P15531 152 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 ICA1Q05084 483 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 KCTD2Q14681 263 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 HSP90AB4PQ58FF6 505 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 CEP85Q6P2H3 762 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 C16orf86Q6ZW13 317 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 TSPYL5Q86VY4 417 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 PCSK9Q8NBP7 692 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 TIFAQ96CG3 184 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 MMP19Q99542 508 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 TEX13BQ9BXU2 312 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 SEZ6LQ9BYH1 1024 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 UPF3AQ9H1J1 476 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 STARD7Q9NQZ5 370 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 GPATCH2Q9NW75 528 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 FAM53CQ9NYF3 392 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 SYNPO2Q9UMS6 1093 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 CNPY2Q9Y2B0 182 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 PLXNA1Q9UIW2 1896 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 COL11A1P12107 1806 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 TRANK1O15050 2925 aa6.1□□□□□ -1.43
R3HDM1-218ENST00000487294 SHISA3A0PJX4 238 aa6.09□□□□□ -1.43
R3HDM1-218ENST00000487294 MPHOSPH10O00566 681 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-218ENST00000487294 PQBP1O60828 265 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-218ENST00000487294 CD4P01730 458 aa6.09□□□□□ -1.43
R3HDM1-218ENST00000487294 PGK2P07205 417 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms