RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PCDHA13Q9Y5I0 950 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 AKR1B10O60218 316 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 PLIN1O60240 522 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 HMGCRP04035 888 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 GLDCP23378 1020 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 ADSLP30566 484 aaPredicted RBP6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 ETV4P43268 484 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 DLX2Q07687 328 aaPredicted RBP6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 GALEQ14376 348 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 UBE3CQ15386 1083 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 TRIM68Q6AZZ1 485 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 SAPCD2Q86UD0 394 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 CAMKK1Q8N5S9 505 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 KAT5Q92993 513 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 HDAC10Q969S8 669 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 C1GALT1C1Q96EU7 318 aa6.35□□□□□ -1.39
PRPF38A-203ENST00000487160 RPTORQ8N122 1335 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 A6NNZ2 444 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 DAPK3O43293 454 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 PRAMEF4O60810 478 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 DTNBO60941 627 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 LTA4HP09960 611 aaKnown RBP6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 TRIM27P14373 513 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 MGAT2Q10469 447 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 ADAM15Q13444 863 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 UBE4AQ14139 1066 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 SEPT2Q15019 361 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 FAM180AQ6UWF9 173 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 ATG14Q6ZNE5 492 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 OVCH2Q7RTZ1 564 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 ADGRG2Q8IZP9 1017 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 MARCH10Q8NA82 808 aaPredicted RBP6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 FAM193BQ96PV7 902 aaPredicted RBP6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 UIMC1Q96RL1 719 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 C7orf25Q9BPX7 421 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 SARGQ9BW04 601 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 KATNBL1Q9H079 304 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 MAN1C1Q9NR34 630 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 CHST12Q9NRB3 414 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 NTMQ9P121 344 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 CNOT6Q9ULM6 557 aaKnown RBP6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 VWA7Q9Y334 891 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
PRPF38A-203ENST00000487160 C2orf78A6NCI8 922 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM171A2A8MVW0 826 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 H3BML4 177 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 KRT1P04264 644 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 ALDH2P05091 517 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 MEOX1P50221 254 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 USP14P54578 494 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 SESN2P58004 480 aaPredicted RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 RHBDL3P58872 404 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 PURAQ00577 322 aaKnown RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 MEF2AQ02078 507 aaPredicted RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 DSC2Q02487 901 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 LLGL1Q15334 1064 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 CYB5RLQ6IPT4 315 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 Q6ZUG5 572 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 MIGA2Q7L4E1 593 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 CHST15Q7LFX5 561 aaPredicted RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 TAS1R1Q7RTX1 841 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 CLEC14AQ86T13 490 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 RHOT1Q8IXI2 618 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 UNC5BQ8IZJ1 945 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 MSL3Q8N5Y2 521 aaKnown RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 SNX33Q8WV41 574 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM84AQ96KN4 292 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 YTHDC1Q96MU7 727 aaKnown RBP6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 TMEM168Q9H0V1 697 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 ERCC6Q03468 1493 aa6.33□□□□□ -1.4
PRPF38A-203ENST00000487160 A0A1B0GTL3 188 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 TUSC2O75896 110 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 UBXN7O94888 489 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 CYP1A1P04798 512 aaPredicted RBP6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 MRE11P49959 708 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 RRADP55042 308 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 C19orf54Q5BKX5 351 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 Q6ZVL8 140 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 PLA2G15Q8NCC3 412 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 TTC17Q96AE7 1141 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms