RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MYL3P08590 195 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 ENO2P09104 434 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-216ENST00000487043 RHCEP18577 417 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 THBS2P35442 1172 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 STAT5AP42229 794 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 BCAR1P56945 870 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 ERVFRD-1P60508 538 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 RHDQ02161 417 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 VPS72Q15906 364 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 CYB5RLQ6IPT4 315 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 TEPPQ6URK8 271 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-216ENST00000487043 IRF2BP1Q8IU81 584 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 OR14C36Q8NHC7 312 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 CALML6Q8TD86 181 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 PARD3BQ8TEW8 1205 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 NRG4Q8WWG1 115 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 ALG3Q92685 438 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 TSPAN17Q96FV3 270 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 FAM193BQ96PV7 902 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-216ENST00000487043 MCOLN1Q9GZU1 580 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 MTG2Q9H4K7 406 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 FAM204AQ9H8W3 233 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 PARD6AQ9NPB6 346 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 INCENPQ9NQS7 918 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 DDX21Q9NR30 783 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCD3-216ENST00000487043 TAGLN3Q9UI15 199 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 CNOT6Q9ULM6 557 aaKnown RBP5.04□□□□□ -1.6
PTCD3-216ENST00000487043 PTPN22Q9Y2R2 807 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 DAAM1Q9Y4D1 1078 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 ADCY10Q96PN6 1610 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 CCNB3Q8WWL7 1395 aa5.04□□□□□ -1.6
PTCD3-216ENST00000487043 DTNBO60941 627 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 CELA3BP08861 270 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 DLG4P78352 724 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 PFKPQ01813 784 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 PGS1Q32NB8 556 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 TMC5Q6UXY8 1006 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 ETV3LQ6ZN32 361 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 CCDC149Q6ZUS6 474 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 DENND1CQ8IV53 801 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 SLC41A1Q8IVJ1 513 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 PRR18Q8N4B5 295 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 FAM156AQ8NDB6 213 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 FATE1Q969F0 183 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 C1GALT1C1Q96EU7 318 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 IL17RAQ96F46 866 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 STRBPQ96SI9 672 aaKnown RBP5.03□□□□□ -1.6
PTCD3-216ENST00000487043 ELAC2Q9BQ52 826 aaKnown RBP5.03□□□□□ -1.6
PTCD3-216ENST00000487043 GALNT8Q9NY28 637 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 DENND2AQ9ULE3 1009 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 LIMCH1Q9UPQ0 1083 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 YBX2Q9Y2T7 364 aaKnown RBP5.03□□□□□ -1.6
PTCD3-216ENST00000487043 CDY2AQ9Y6F7 541 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 RIMBP3CA6NJZ7 1639 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 RIMBP3BA6NNM3 1639 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 ZCCHC11Q5TAX3 1644 aaKnown RBP5.03□□□□□ -1.6
PTCD3-216ENST00000487043 RIMBP3Q9UFD9 1639 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 MYOM3Q5VTT5 1437 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 MIA2Q96PC5 1412 aa5.03□□□□□ -1.6
PTCD3-216ENST00000487043 CCDC154A6NI56 674 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF839A8K0R7 811 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 CREB3O43889 395 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 OPHN1O60890 802 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 SEMA7AO75326 666 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ZBED1O96006 694 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ECE1P42892 770 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 MORC3Q14149 939 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 CR1LQ2VPA4 569 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ANO4Q32M45 955 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 PLEKHN1Q494U1 663 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 VASNQ6EMK4 673 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ZC3H14Q6PJT7 736 aaKnown RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 CD300LDQ6UXZ3 194 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 LIPIQ6XZB0 460 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 GAREM2Q75VX8 874 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 MORC1Q86VD1 984 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 PROSER1Q86XN7 944 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 MIB1Q86YT6 1006 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 SPICE1Q8N0Z3 855 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 FAM26EQ8N5C1 309 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 WDR48Q8TAF3 677 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 GAB3Q8WWW8 586 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 RSAD2Q8WXG1 361 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 DPF2Q92785 391 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 NOL10Q9BSC4 688 aaKnown RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 KLHL14Q9P2G3 628 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 FTSJ1Q9UET6 329 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 EVLQ9UI08 416 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-216ENST00000487043 INTUQ9ULD6 942 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 PHTF1Q9UMS5 762 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms