RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SUGP1Q8IWZ8 645 aaKnown RBP21.49■■□□□ 1.03
COL27A1-205ENST00000485397 EXOC8Q8IYI6 725 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 NECAB1Q8N987 351 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 TMEM87AQ8NBN3 555 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 PRSS33Q8NF86 280 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 ASIC4Q96FT7 647 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 C2CD4DB7Z1M9 353 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 OTUD6AQ7L8S5 288 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 ZBTB33Q86T24 672 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 FERMT3Q86UX7 667 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 FBXL6Q8N531 539 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 RNF149Q8NC42 400 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 URGCPQ8TCY9 931 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 SLC22A17Q8WUG5 538 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 ZSWIM4Q9H7M6 989 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 RSAD1Q9HA92 442 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 NR2E1Q9Y466 385 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 IRAK3Q9Y616 596 aa21.48■■□□□ 1.03
COL27A1-205ENST00000485397 CARNS1A5YM72 827 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 SLITRK3O94933 977 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 BAG4O95429 457 aaKnown RBP21.47■■□□□ 1.03
COL27A1-205ENST00000485397 KRT2P35908 639 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 TPH2Q8IWU9 490 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 SLFN12Q8IYM2 578 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 FEZF2Q8TBJ5 459 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 TCP11Q8WWU5 503 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 WASF1Q92558 559 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 TNFRSF25Q93038 417 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 NECTIN4Q96NY8 510 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 MTRQ99707 1265 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 XPNPEP1Q9NQW7 623 aa21.47■■□□□ 1.03
COL27A1-205ENST00000485397 ASAP2O43150 1006 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 LARGE1O95461 756 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 MTHFRP42898 656 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 GIT2Q14161 759 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 PTPN14Q15678 1187 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 ME3Q16798 604 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 KREMEN2Q8NCW0 462 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 RIPOR3Q96MK2 946 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 DZANK1Q9NVP4 752 aa21.46■■□□□ 1.03
COL27A1-205ENST00000485397 GAS2O43903 313 aaKnown RBP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 POMCP01189 267 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 ALDH2P05091 517 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 SSBP05455 408 aaKnown RBP eCLIP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 VCPP55072 806 aaKnown RBP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 ANAPC15P60006 121 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 SMG8Q8ND04 991 aaKnown RBP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 FAM193BQ96PV7 902 aaPredicted RBP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 PHOX2BQ99453 314 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 EIF2AK1Q9BQI3 630 aaKnown RBP21.45■■□□□ 1.02
COL27A1-205ENST00000485397 FAN1Q9Y2M0 1017 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 CNTNAP2Q9UHC6 1331 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 ZDBF2Q9HCK1 2354 aa21.45■■□□□ 1.02
COL27A1-205ENST00000485397 TRIOO75962 3097 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 WNT7AO00755 349 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 PDGFBP01127 241 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-205ENST00000485397 NCLP19338 710 aaKnown RBP21.44■■□□□ 1.02
COL27A1-205ENST00000485397 FOSBP53539 338 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 ATAT1Q5SQI0 421 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 KIAA1841Q6NSI8 718 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 CPB2Q96IY4 423 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 KLHL5Q96PQ7 755 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 TMEM175Q9BSA9 504 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 EIF2AQ9BY44 585 aaKnown RBP21.44■■□□□ 1.02
COL27A1-205ENST00000485397 RNF39Q9H2S5 420 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 KANSL3Q9P2N6 904 aa21.44■■□□□ 1.02
COL27A1-205ENST00000485397 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 NRP1O14786 923 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 TSPAN1O60635 241 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 ERLIN2O94905 339 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 ITGA4P13612 1032 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 PTENP60484 403 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 TCF15Q12870 199 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 CALCRLQ16602 461 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 TMC5Q6UXY8 1006 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 CABP7Q86V35 215 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 NSUN7Q8NE18 718 aaKnown RBP21.43■■□□□ 1.02
COL27A1-205ENST00000485397 ASAP3Q8TDY4 903 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 GTF3C6Q969F1 213 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 HSD17B14Q9BPX1 270 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 SMOC2Q9H3U7 446 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 DBR1Q9UK59 544 aaKnown RBP21.43■■□□□ 1.02
COL27A1-205ENST00000485397 PCDHA12Q9UN75 941 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 IPPQ9Y573 584 aa21.43■■□□□ 1.02
COL27A1-205ENST00000485397 A0A087WWV3 80 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 JAK2O60674 1132 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 LILRB3O75022 631 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 LYPLA2O95372 231 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 BRD1O95696 1058 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 ASGR2P07307 311 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 CNPP09543 421 aaKnown RBP21.42■■□□□ 1.02
COL27A1-205ENST00000485397 KLRC2P26717 231 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 AVPR2P30518 371 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 PTPN5P54829 565 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 MXD4Q14582 209 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-205ENST00000485397 PPFIBP1Q86W92 1011 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 CNNM3Q8NE01 707 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 GAD1Q99259 594 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 309.4 ms