RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 FBXO9Q9UK97 447 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PPIP5K1Q6PFW1 1433 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RHOT2Q8IXI1 618 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 EXT2Q93063 718 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CNDP1Q96KN2 507 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 MARCOQ9UEW3 520 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 GOLGA8TH3BQL2 631 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 UBOX5O94941 541 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 FKBP3Q00688 224 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 STAT4Q14765 748 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 FAM26FQ5R3K3 315 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RESP18Q5W5W9 173 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 LRRC34Q8IZ02 419 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RYBPQ8N488 228 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PAGE5Q96GU1 130 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CYTH3O43739 400 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 TNFAIP8O95379 198 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PTGS2P35354 604 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 GJA10Q969M2 543 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 C19orf60Q96EN9 201 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RXFP1Q9HBX9 757 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 USE1Q9NZ43 259 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 LGALS16A8MUM7 142 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 USP1O94782 785 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 SNRPA1P09661 255 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CASP5P51878 434 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 IFRD2Q12894 506 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 GPS1Q13098 491 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CTTNQ14247 550 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 IRGCQ6NXR0 463 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ZNF654Q8IZM8 581 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 C19orf18Q8NEA5 215 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RBMX2Q9Y388 322 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ATF4P18848 351 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 FAM178BQ8IXR5 827 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 IGF1RP08069 1367 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 K7ENM7 598 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PSTPIP1O43586 416 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ZBED8Q8IZ13 594 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PTPRGP23470 1445 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ZCCHC7Q8N3Z6 543 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CDC26Q8NHZ8 85 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PCDHA12Q9UN75 941 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC78A2IDD5 438 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 ARHGAP17Q68EM7 881 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RASGRP2Q7LDG7 609 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 NSUN7Q8NE18 718 aaKnown RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 PPP2R3CQ969Q6 453 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 SPRTNQ9H040 489 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-207ENST00000483888 VPS11Q9H270 941 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 APPL1Q9UKG1 709 aa10.85□□□□□ -0.67
COL12A1-207ENST00000483888 RGS20O76081 388 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 BPIFB4P59827 614 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TIMM10P62072 90 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TUBA1BP68363 451 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 CNGA2Q16280 664 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TUBA1AQ71U36 451 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC60Q8IWA6 550 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 NUP93Q8N1F7 819 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 EXOSC4Q9NPD3 245 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 GALNT8Q9NY28 637 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ARHGEF37A1IGU5 675 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TCAIMQ8N3R3 496 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ARHGEF3Q9NR81 526 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 GON4LQ3T8J9 2241 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 CDH2P19022 906 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 PEX5P50542 639 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 PPM1NQ8N819 430 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ACAP3Q96P50 834 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 UBE2TQ9NPD8 197 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 GHRP10912 638 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 PPHLN1Q8NEY8 458 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 MOSPD1Q9UJG1 213 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ADCY6O43306 1168 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 TRIM13O60858 407 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 EFCAB14O75071 495 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms