RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CUL9Q8IWT3 2517 aa4.61□□□□□ -1.67
LRCH3-217ENST00000483442 CENPFP49454 3210 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 A0A1W2PPC1 479 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 HTATSF1O43719 755 aaKnown RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 ITGAVP06756 1048 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 U2AF1L5P0DN76 240 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 HSPA5P11021 654 aaKnown RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 SLC6A11P48066 632 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 MLLT6P55198 1093 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 U2AF1Q01081 240 aaKnown RBP eCLIP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 CDSNQ15517 529 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 HSP90AB3PQ58FF7 597 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 FAM26FQ5R3K3 315 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 C6orf15Q6UXA7 325 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 ARRDC4Q8NCT1 418 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 PNISRQ8TF01 805 aaKnown RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 MBD6Q96DN6 1003 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 MRRFQ96E11 262 aaKnown RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 ZSWIM3Q96MP5 696 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 SAMD11Q96NU1 681 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 AP5M1Q9H0R1 490 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 DEFB129Q9H1M3 183 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 PPP4R1LQ9P1A2 415 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 KIAA1522Q9P206 1035 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
LRCH3-217ENST00000483442 TIMM13Q9Y5L4 95 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-217ENST00000483442 C1QTNF3-AMACRE9PGA6 284 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 NOP56O00567 594 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 TFRCP02786 760 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 GJB1P08034 283 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 CCL5P13501 91 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 ZNF28P17035 718 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 ECI1P42126 302 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 HTTP42858 3142 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 NUP98P52948 1817 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 RPL11P62913 178 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 SUPT20HL1Q3ZLR7 823 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 DACT2Q5SW24 774 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 TTLL5Q6EMB2 1281 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 POMZP3Q6PJE2 187 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 LRP10Q7Z4F1 713 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 SPRED1Q7Z699 444 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 UBE2Q1Q7Z7E8 422 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 RIOX2Q8IUF8 465 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 APOBEC3FQ8IUX4 373 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 LGI4Q8N135 537 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 FAM43AQ8N2R8 423 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 RAET1EQ8TD07 263 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 MICAL1Q8TDZ2 1067 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 OPTNQ96CV9 577 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 TRMT2BQ96GJ1 504 aaKnown RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 SEC16BQ96JE7 1060 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 ZMYND8Q9ULU4 1186 aaPredicted RBP4.59□□□□□ -1.67
LRCH3-217ENST00000483442 NUDCQ9Y266 331 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
LRCH3-217ENST00000483442 TAF1P21675 1872 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF609O15014 1411 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF536O15090 1300 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 CCL15-CCL14A0A0B4J2E2 113 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 CLRN2A0PK11 232 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 SMAD7O15105 426 aaKnown RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 TLR2O60603 784 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 WDHD1O75717 1129 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 SGPL1O95470 568 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 CAPNS1P04632 268 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 HOXD10P28358 340 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 PSMC4P43686 418 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 GTF2A2P52657 109 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF143P52747 638 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 LACTBP83111 547 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ICAM4Q14773 271 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 DLGAP5Q15398 846 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 CCL15Q16663 113 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 MROH9Q5TGP6 573 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 STRIP1Q5VSL9 837 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF227Q86WZ6 799 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ANKRD13AQ8IZ07 590 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 Q8N1X5 172 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 TTC9BQ8N6N2 239 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 SLC16A11Q8NCK7 471 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 U2AF1L4Q8WU68 220 aaKnown RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 BRI3BPQ8WY22 251 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 ZCCHC14Q8WYQ9 949 aaKnown RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 DIO2Q92813 273 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 CFAP53Q96M91 514 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 GDF15Q99988 308 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 SCAND2PQ9GZW5 306 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-217ENST00000483442 RIPOR2Q9Y4F9 1068 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 PCDHAC2Q9Y5I4 1007 aa4.58□□□□□ -1.68
LRCH3-217ENST00000483442 RANBP2P49792 3224 aaKnown RBP4.57□□□□□ -1.68
LRCH3-217ENST00000483442 TCRBV5S2A0A599 114 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 GPR42O15529 346 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 TADA3O75528 432 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 FSHBP01225 129 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 LRG1P02750 347 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 SCG5P05408 212 aa4.57□□□□□ -1.68
LRCH3-217ENST00000483442 SNRPB2P08579 225 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms