RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 USP18Q9UMW8 372 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 SORCS3Q9UPU3 1222 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 PCDHB6Q9Y5E3 794 aa4.59□□□□□ -1.67
LAPTM4A-202ENST00000483117 TMEM191CA6NGB0 347 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 LY86O95711 162 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 CASRP41180 1078 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 COL10A1Q03692 680 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 LRRC32Q14392 662 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 PCBP1Q15365 356 aaKnown RBP eCLIP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 TCEA2Q15560 299 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 TKFCQ3LXA3 575 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 DCAF17Q5H9S7 520 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 NAIF1Q69YI7 327 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 ESPNLQ6ZVH7 1005 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 LRRTM3Q86VH5 581 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 VRK3Q8IV63 474 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 PASD1Q8IV76 773 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 UNC5BQ8IZJ1 945 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 OR5M3Q8NGP4 307 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 CPT1CQ8TCG5 803 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 FERMT2Q96AC1 680 aa4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 GPR101Q96P66 508 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 CPPED1Q9BRF8 314 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 FDXACB1Q9BRP7 624 aaPredicted RBP4.58□□□□□ -1.68
LAPTM4A-202ENST00000483117 ST20-MTHFSA0A0A6YYL1 179 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 PFKMP08237 780 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 KPNA1P52294 538 aaPredicted RBP4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 RHOUQ7L0Q8 258 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 ZNF575Q86XF7 245 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 SYNPOQ8N3V7 929 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 MSL3Q8N5Y2 521 aaKnown RBP4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 CDYL2Q8N8U2 506 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 PROKR1Q8TCW9 393 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 LENG9Q96B70 501 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 CPEB1Q9BZB8 566 aaKnown RBP4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 SPTLC3Q9NUV7 552 aa4.57□□□□□ -1.68
LAPTM4A-202ENST00000483117 PRSS38A1L453 326 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 NRP1O14786 923 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 SEC24DO94855 1032 aaPredicted RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 SCAF4O95104 1147 aaKnown RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 POU3F2P20265 443 aaPredicted RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 PROZP22891 400 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 ZFP36P26651 326 aaKnown RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 SEPT7Q16181 437 aaKnown RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 HOMER1Q86YM7 354 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 DHX37Q8IY37 1157 aaKnown RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 SYNE4Q8N205 404 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 SMC1BQ8NDV3 1235 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 GPR150Q8NGU9 434 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 GAB3Q8WWW8 586 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 NINJ1Q92982 152 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 CRAMP1Q96RY5 1269 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 FANCLQ9NW38 375 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 FZD1Q9UP38 647 aa4.56□□□□□ -1.68
LAPTM4A-202ENST00000483117 DNAJC6O75061 913 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 ABHD16AO95870 558 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 ITGB1P05556 798 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 MGAT5Q09328 741 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 LY6G5CQ5SRR4 150 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 KCNV1Q6PIU1 500 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 LRRC55Q6ZSA7 311 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 C16orf86Q6ZW13 317 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 TAS1R1Q7RTX1 841 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 XYLT1Q86Y38 959 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 IL17RAQ96F46 866 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 NAF1Q96HR8 494 aaKnown RBP4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 DRC1Q96MC2 740 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 ANO3Q9BYT9 981 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 USP36Q9P275 1121 aaKnown RBP4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 EIF2B4Q9UI10 523 aaKnown RBP4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 PPP2R3BQ9Y5P8 575 aa4.55□□□□□ -1.68
LAPTM4A-202ENST00000483117 A0A1W2PR48 441 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 AHRRA9YTQ3 701 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 TRIM24O15164 1050 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 GCP02774 474 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 CLEC2LP0C7M8 214 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 BMP5P22003 454 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 XPAP23025 273 aaPredicted RBP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 APOBEC3AP31941 199 aaPredicted RBP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 FAM189BP81408 668 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 DUSP2Q05923 314 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 PPARAQ07869 468 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 MRPL49Q13405 166 aaKnown RBP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 PTPAQ15257 358 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 VPS72Q15906 364 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 GPR158Q5T848 1215 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 FAM83AQ86UY5 434 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 NIM1KQ8IY84 436 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 ZNF610Q8N9Z0 462 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 OR52N2Q8NGI0 321 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 UBXN4Q92575 508 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 APPBP2Q92624 585 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 FAM193BQ96PV7 902 aaPredicted RBP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 TARS2Q9BW92 718 aaKnown RBP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms