RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TTC36A6NLP5 189 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 LGR5O75473 907 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 CCND1P24385 295 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 COPB2P35606 906 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 DCAF12L1Q5VU92 463 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 PCDHAC2Q9Y5I4 1007 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 DPPA5A6NC42 116 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 RPL13P26373 211 aaKnown RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ANXA13P27216 316 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 LRRC23Q53EV4 343 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ADAT2Q7Z6V5 191 aaKnown RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 DYDC1Q8WWB3 177 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 PSMD1Q99460 953 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 AMFRQ9UKV5 643 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 INTUQ9ULD6 942 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 F8VZ95 297 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ABCB4P21439 1286 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 CDC42EP5Q6NZY7 148 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 SLC30A10Q6XR72 485 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 DRAXINQ8NBI3 349 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 NAF1Q96HR8 494 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 UTP11Q9Y3A2 253 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 HIP1RO75146 1068 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 BBOX1O75936 387 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 UBOX5O94941 541 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 NPEPPSP55786 919 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 Q4G0T1 1027 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 AGBL2Q5U5Z8 902 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ABCF3Q9NUQ8 709 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 EML1O00423 815 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 MSH4O15457 936 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 CHRNA5P30532 468 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 STAT1P42224 750 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 PRPF4BQ13523 1007 aaKnown RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 PIGOQ8TEQ8 1089 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
CCDC78-213ENST00000482878 ATAD5Q96QE3 1844 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 DDX3YO15523 660 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 GYS1P13807 737 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 SOX5P35711 763 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 RIPK1Q13546 671 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 COG2Q14746 738 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ZC2HC1CQ53FD0 456 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 LRRC34Q8IZ02 419 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 PIDD1Q9HB75 910 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 GTPBP10A4D1E9 387 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 SPDYE5A6NIY4 337 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 TBX3O15119 743 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 CHN1P15882 459 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ABL2P42684 1182 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 PPATQ06203 517 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 DRAP1Q14919 205 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ARHGEF26Q96DR7 871 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 NSRP1Q9H0G5 558 aaKnown RBP13.35□□□□□ -0.27
CCDC78-213ENST00000482878 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 FAM114A2Q9NRY5 505 aa13.35□□□□□ -0.27
CCDC78-213ENST00000482878 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms