RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CASD1Q96PB1 797 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
SMIM4-204ENST00000482728 C17orf75Q9HAS0 396 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 TYW1Q9NV66 732 aaKnown RBP20.3■□□□□ 0.84
SMIM4-204ENST00000482728 PCDHB12Q9Y5F1 795 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 CDH23Q9H251 3354 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 COL4A6Q14031 1691 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 SFI1A8K8P3 1242 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 K7ERI5 159 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 KRT18P05783 430 aaKnown RBP20.29■□□□□ 0.84
SMIM4-204ENST00000482728 ATF7P17544 494 aaPredicted RBP20.29■□□□□ 0.84
SMIM4-204ENST00000482728 ARF4P18085 180 aaPredicted RBP20.29■□□□□ 0.84
SMIM4-204ENST00000482728 PRPF4BQ13523 1007 aaKnown RBP20.29■□□□□ 0.84
SMIM4-204ENST00000482728 AMHR2Q16671 573 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 CLLU1OSQ5K130 101 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 RRAGBQ5VZM2 374 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 GPBP1Q86WP2 473 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 RAD54LQ92698 747 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 FZD8Q9H461 694 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 RNF19AQ9NV58 838 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 CFAP45Q9UL16 551 aa20.29■□□□□ 0.84
SMIM4-204ENST00000482728 C5orf67F2Z3F1 127 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 B4GALT5O43286 388 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 PPP6R2O75170 966 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 YEATS4O95619 227 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 PRKCBP05771 671 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 DDIT3P35638 169 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 NPTX2P47972 431 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 SMTNP53814 917 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 FAM187BQ17R55 369 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 NAALADL2Q58DX5 795 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 PPP4R3CPQ6ZMV5 832 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 MRPL10Q7Z7H8 261 aaKnown RBP20.28■□□□□ 0.84
SMIM4-204ENST00000482728 HACE1Q8IYU2 909 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 DAW1Q8N136 415 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 LRRC43Q8N309 656 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 RSPH1Q8WYR4 309 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 KIFC3Q9BVG8 833 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 MRPL9Q9BYD2 267 aaKnown RBP20.28■□□□□ 0.84
SMIM4-204ENST00000482728 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 BLOC1S4Q9NUP1 217 aa20.28■□□□□ 0.84
SMIM4-204ENST00000482728 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
SMIM4-204ENST00000482728 MYO7AQ13402 2215 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 FNDC1Q4ZHG4 1894 aaPredicted RBP20.27■□□□□ 0.84
SMIM4-204ENST00000482728 A0A1B0GUA9 196 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 ACKR2O00590 384 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 LINC00271P0C7V0 271 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 ITGA4P13612 1032 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 MCM6Q14566 821 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 SLC27A1Q6PCB7 646 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 LARP4BQ92615 738 aaKnown RBP20.27■□□□□ 0.84
SMIM4-204ENST00000482728 P2RX5Q93086 422 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 MRPL38Q96DV4 380 aaKnown RBP20.27■□□□□ 0.84
SMIM4-204ENST00000482728 EIF2AQ9BY44 585 aaKnown RBP20.27■□□□□ 0.84
SMIM4-204ENST00000482728 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 UBN1Q9NPG3 1134 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 INPP5FQ9Y2H2 1132 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 TRANK1O15050 2925 aa20.27■□□□□ 0.84
SMIM4-204ENST00000482728 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 NPHP3-ACAD11A0A0J9YXS1 232 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 PLS3P13797 630 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 LAG3P18627 525 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 RNASELQ05823 741 aaKnown RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 MAPK7Q13164 816 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 SKIV2LQ15477 1246 aaKnown RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 CSPP1Q1MSJ5 1256 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 NOMO2Q5JPE7 1267 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 CCDC73Q6ZRK6 1079 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 CDR2LQ86X02 465 aaPredicted RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 KLHL23Q8NBE8 558 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 KCNG4Q8TDN1 519 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 ALG13Q9NP73 1137 aaKnown RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 LARSQ9P2J5 1176 aaKnown RBP20.26■□□□□ 0.83
SMIM4-204ENST00000482728 STK17AQ9UEE5 414 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 PLAGL2Q9UPG8 496 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 IPPQ9Y573 584 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 PHLPP2Q6ZVD8 1323 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 CNTNAP2Q9UHC6 1331 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 COL6A3P12111 3177 aa20.26■□□□□ 0.83
SMIM4-204ENST00000482728 RALGAPA2Q2PPJ7 1873 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 MEIS3P2A8K0S8 358 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 N4BP3O15049 544 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 CUTAO60888 179 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 OFD1O75665 1012 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 NPTXRO95502 500 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 BRD1O95696 1058 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 ME1P48163 572 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
SMIM4-204ENST00000482728 AGMOQ6ZNB7 445 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 LRRC55Q6ZSA7 311 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 THNSL1Q8IYQ7 743 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
SMIM4-204ENST00000482728 SLC17A8Q8NDX2 589 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 SPIRE2Q8WWL2 714 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 ADPGKQ9BRR6 497 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 NTPCRQ9BSD7 190 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms