RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 UBE3DQ7Z6J8 389 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 C12orf40Q86WS4 652 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 FAM126BQ8IXS8 530 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 SLC43A3Q8NBI5 491 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 FAM161BQ96MY7 647 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 NECAB3Q96P71 396 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 KRTAP4-9Q9BYQ8 210 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 MTIF3Q9H2K0 278 aaKnown RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 TTYH1Q9H313 450 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 VTA1Q9NP79 307 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 ISY1Q9ULR0 285 aaKnown RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 KIAA1217Q5T5P2 1943 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 GBF1Q92538 1859 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 KAT6AQ92794 2004 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 BAZ2BQ9UIF8 2168 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 TET1Q8NFU7 2136 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 MYADML2A6NDP7 307 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 ZNF503-AS2A6NEH8 195 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 B4DLN1 442 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 NKRFO15226 690 aaKnown RBP eCLIP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 FOXP2O15409 715 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 ADCY6O43306 1168 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 FGAP02671 866 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 SUPT20HL2P0C7V6 817 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 HSPD1P10809 573 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 NTF4P34130 210 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 MRPL12P52815 198 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 EPHB4P54760 987 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 MLANAQ16655 118 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 FSCN1Q16658 493 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 NKPD1Q17RQ9 610 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 CCDC178Q5BJE1 867 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 TMEM240Q5SV17 173 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 TAPT1Q6NXT6 567 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 PSRC1Q6PGN9 363 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 KCTD1Q719H9 257 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 NOL8Q76FK4 1167 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 TLK2Q86UE8 772 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 RPUSD2Q8IZ73 545 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 DNERQ8NFT8 737 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 MPHOSPH6Q99547 160 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.27e-7■■□□□ 13.4
LRCH3-216ENST00000481048 RANBP17Q9H2T7 1088 aaKnown RBP7.57□□□□□ -1.2
LRCH3-216ENST00000481048 CACNA2D2Q9NY47 1150 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 FAM53CQ9NYF3 392 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 CCPG1Q9ULG6 757 aa7.57□□□□□ -1.2
LRCH3-216ENST00000481048 PRRC2BQ5JSZ5 2229 aaKnown RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 BRWD1Q9NSI6 2320 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 PNMA6FA0A0J9YX94 578 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 KPNA6O60684 536 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 PFKMP08237 780 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 FOSL2P15408 326 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 CSF2RAP15509 400 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 ITGA7Q13683 1181 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 DUSP28Q4G0W2 176 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 BRDTQ58F21 947 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 MUM1L1Q5H9M0 696 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 SYDE2Q5VT97 1194 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 CXCL17Q6UXB2 119 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 MFSD6Q6ZSS7 791 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 ZNF365Q70YC5 407 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 C16orf59Q7L2K0 433 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 HERVK_113Q902F9 699 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 TIFAQ96CG3 184 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 RNF41Q9H4P4 317 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-216ENST00000481048 IL23AQ9NPF7 189 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 SAMM50Q9Y512 469 aa7.56□□□□□ -1.2
LRCH3-216ENST00000481048 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 ASTN1O14525 1302 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 WDR19Q8NEZ3 1342 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 VCANP13611 3396 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 NMT2O60551 498 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 FGBP02675 491 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 SNHG28P0DPA3 235 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 PDHBP11177 359 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 BMP6P22004 513 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 CPT1AP50416 773 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 ALDH5A1P51649 535 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-216ENST00000481048 BEX3Q00994 111 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 PLCB3Q01970 1234 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 BAATQ14032 418 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-216ENST00000481048 RAB30Q15771 203 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 AKNAD1Q5T1N1 836 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 GPATCH4Q5T3I0 446 aaKnown RBP7.55□□□□□ -1.2
LRCH3-216ENST00000481048 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
LRCH3-216ENST00000481048 VPS53Q5VIR6 699 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms