RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 KCNH6Q9H252 994 aa12□□□□□ -0.49
CNKSR1-204ENST00000480348 USP15Q9Y4E8 981 aaPredicted RBP12□□□□□ -0.49
CNKSR1-204ENST00000480348 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 DGAT1O75907 488 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 SRGAP2CP0DJJ0 459 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 AXLP30530 894 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 TECP42680 631 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 BCAR1P56945 870 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 POU5F1BQ06416 359 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 LAMTOR4Q0VGL1 99 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 KCNC3Q14003 757 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 NBR1Q14596 966 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 NOMO2Q5JPE7 1267 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 FERMT3Q86UX7 667 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 HACE1Q8IYU2 909 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 RNF149Q8NC42 400 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 PIGOQ8TEQ8 1089 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 PRPF31Q8WWY3 499 aaKnown RBP11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 ANKEF1Q9NU02 776 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 IRAK3Q9Y616 596 aa11.99□□□□□ -0.49
CNKSR1-204ENST00000480348 ZMYM2Q9UBW7 1377 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 LOC730098B7Z3J9 87 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 PER2O15055 1255 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 CBX2Q14781 532 aaPredicted RBP11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 MRPL43Q8N983 215 aaKnown RBP11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 TMEM87AQ8NBN3 555 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 SUSD6Q92537 303 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 NECTIN4Q96NY8 510 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 NFKBIZQ9BYH8 718 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 RSAD1Q9HA92 442 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 DZANK1Q9NVP4 752 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
CNKSR1-204ENST00000480348 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 A0A087WWV3 80 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 C2orf71A6NGG8 1288 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 USO1O60763 962 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 CCT6AP40227 531 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 PBX3P40426 434 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 ITIH3Q06033 890 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 HAUS3Q68CZ6 603 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 CES5AQ6NT32 575 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 DDX53Q86TM3 631 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 PPFIBP1Q86W92 1011 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 VN1R2Q8NFZ6 395 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 IGSF21Q96ID5 467 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 TMEM175Q9BSA9 504 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 BACH2Q9BYV9 841 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 ZBP1Q9H171 429 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 TUFT1Q9NNX1 390 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 INPP5FQ9Y2H2 1132 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 NR2E1Q9Y466 385 aa11.97□□□□□ -0.49
CNKSR1-204ENST00000480348 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 HIDE1A8MVS5 230 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 MED24O75448 989 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 OFD1O75665 1012 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 CTSAP10619 480 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 CA8P35219 290 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 RARRES1P49788 294 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 PTENP60484 403 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 PTGDRQ13258 359 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 MAEAQ7L5Y9 396 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 EDAQ92838 391 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 LPPQ93052 612 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 NACC1Q96RE7 527 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 TRIM6Q9C030 488 aaPredicted RBP11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 LRWD1Q9UFC0 647 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 RAPGEFL1Q9UHV5 662 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 HCFC2Q9Y5Z7 792 aa11.96□□□□□ -0.49
CNKSR1-204ENST00000480348 TECTAO75443 2155 aa11.96□□□□□ -0.5
CNKSR1-204ENST00000480348 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms