RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PDGFCQ9NRA1 345 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 TBC1D22BQ9NU19 505 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PDRG1Q9NUG6 133 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PRKAG2Q9UGJ0 569 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 MRVI1Q9Y6F6 885 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 SQORQ9Y6N5 450 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 PDE4DIPQ5VU43 2346 aa5.58□□□□□ -1.52
PTCD3-213ENST00000480102 EMSYQ7Z589 1322 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 IGKV6D-21A0A0A0MT36 114 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 SMCO2A6NFE2 343 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 CPLX1O14810 134 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 TBX3O15119 743 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 GPR182O15218 404 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 DYNC1LI2O43237 492 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 ALX3O95076 343 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 ARIH2O95376 493 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 WISP1O95388 367 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 GNAT1P11488 350 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 GCFC2P16383 781 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 KCNA2P16389 499 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 ADCY7P51828 1080 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 NAPAP54920 295 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 SNAP25P60880 206 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 HMGN5P82970 282 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 AKAP17AQ02040 695 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 TLE2Q04725 743 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 APOBRQ0VD83 1088 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 MTMR1Q13613 665 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 RABEP1Q15276 862 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 Q4G0T1 1027 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 HABP4Q5JVS0 413 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 RASIP1Q5U651 963 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 MFSD5Q6N075 450 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 USP17L6PQ6QN14 398 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 Q6ZS46 218 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 PLPPR4Q7Z2D5 763 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 HEATR3Q7Z4Q2 680 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 SKAP1Q86WV1 359 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 GALNT12Q8IXK2 581 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 DHX37Q8IY37 1157 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 SMAP1Q8IYB5 467 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 TDHQ8IZJ6 230 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 REXO1Q8N1G1 1221 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 RDM1Q8NG50 284 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 AFAP1L1Q8TED9 768 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 GTF3C6Q969F1 213 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 ZSCAN31Q96LW9 406 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 MXRA8Q9BRK3 442 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 C16orf70Q9BSU1 422 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 MYL10Q9BUA6 226 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 ANO3Q9BYT9 981 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 UPF2Q9HAU5 1272 aaKnown RBP5.57□□□□□ -1.52
PTCD3-213ENST00000480102 OSGEPQ9NPF4 335 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 KCNH7Q9NS40 1196 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 KCNK4Q9NYG8 393 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 PCDHA6Q9UN73 950 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 PCDHA4Q9UN74 947 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 PCDHA8Q9Y5H6 950 aa5.57□□□□□ -1.52
PTCD3-213ENST00000480102 MGAMO43451 1857 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 GRIN2DO15399 1336 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 NRCAMQ92823 1304 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 IGLV3-22A0A075B6J6 115 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 MYADML2A6NDP7 307 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 EFCAB14O75071 495 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 ADAM11O75078 769 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 CPNE3O75131 537 aaKnown RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 ITGB5P18084 799 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 HOXA13P31271 388 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SFNP31947 248 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 ADAM17P78536 824 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SMAD3P84022 425 aaKnown RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SSRP1Q08945 709 aaKnown RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 ORC1Q13415 861 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 PPIGQ13427 754 aaKnown RBP eCLIP5.56□□□□□ -1.525e-7■■□□□ 12.4
PTCD3-213ENST00000480102 BFSP2Q13515 415 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 TRIM60Q495X7 471 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 TAF2Q6P1X5 1199 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 PSRC1Q6PGN9 363 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 B3GNT9Q6UX72 402 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 CXCL17Q6UXB2 119 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 VN1R5Q7Z5H4 357 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 AGGF1Q8N302 714 aaeCLIP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 TMEM199Q8N511 208 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 OR6J1Q8NGC5 347 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 ASAP3Q8TDY4 903 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 FOXD4L4Q8WXT5 416 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SEPT1Q8WYJ6 367 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 RSPH1Q8WYR4 309 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 KAT2BQ92831 832 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 KLHDC7BQ96G42 594 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SPATA33Q96N06 139 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 GPR20Q99678 358 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 LBHD1Q9BQE6 289 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 RBCK1Q9BYM8 510 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 LRRC2Q9BYS8 371 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 UPF3BQ9BZI7 483 aaKnown RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 SLKQ9H2G2 1235 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 GTF2IRD1Q9UHL9 959 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms