RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SMRP1Q8NCR6 262 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 POF1BQ8WVV4 589 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 TCP11Q8WWU5 503 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 SUSD6Q92537 303 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
DDX56-211ENST00000479602 LARP4BQ92615 738 aaKnown RBP9.88□□□□□ -0.83
DDX56-211ENST00000479602 KCNH6Q9H252 994 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 CWH43Q9H720 699 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 ELAC1Q9H777 363 aaKnown RBP9.88□□□□□ -0.83
DDX56-211ENST00000479602 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 KBTBD4Q9NVX7 518 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 FAM50BQ9Y247 325 aa9.88□□□□□ -0.83
DDX56-211ENST00000479602 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 CYP11B2P19099 503 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 TMOD1P28289 359 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 ERVFC1P60507 584 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 UBE2HP62256 183 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 CYP4A11Q02928 519 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 TBC1D8BQ0IIM8 1120 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 PAK2Q13177 524 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 MXD4Q14582 209 aaPredicted RBP9.87□□□□□ -0.83
DDX56-211ENST00000479602 ECM1Q16610 540 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 LRRC55Q6ZSA7 311 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 FAM228AQ86W67 206 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 ENGASEQ8NFI3 743 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 VN1R2Q8NFZ6 395 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 RSPH1Q8WYR4 309 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 RAD54LQ92698 747 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 KIFAP3Q92845 792 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 CCDC34Q96HJ3 373 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 CDK5RAP3Q96JB5 506 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 NTPCRQ9BSD7 190 aaKnown RBP9.87□□□□□ -0.83
DDX56-211ENST00000479602 S1PR5Q9H228 398 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 ST6GALNAC4Q9H4F1 302 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 ATP6V0A4Q9HBG4 840 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 XPNPEP1Q9NQW7 623 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 C1orf112Q9NSG2 853 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 DDX19AQ9NUU7 478 aaKnown RBP9.87□□□□□ -0.83
DDX56-211ENST00000479602 TFIP11Q9UBB9 837 aaKnown RBP9.87□□□□□ -0.83
DDX56-211ENST00000479602 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 CD207Q9UJ71 328 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 HCN4Q9Y3Q4 1203 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
DDX56-211ENST00000479602 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 PP2D1A8MPX8 630 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 GPR182O15218 404 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 RPS6KA5O75582 802 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 PLCG1P19174 1290 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 PTMSP20962 102 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 ARL2P36404 184 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 PLCB3Q01970 1234 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 FAM160A1Q05DH4 1040 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 CTTNQ14247 550 aaKnown RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 EMC2Q15006 297 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 CDCA2Q69YH5 1023 aaPredicted RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 TPH2Q8IWU9 490 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 EDAQ92838 391 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 EPSTI1Q96J88 318 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 CEP170P1Q96L14 293 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 CLIC6Q96NY7 704 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 CASD1Q96PB1 797 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 ADAM2Q99965 735 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 GTPBP4Q9BZE4 634 aaKnown RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 OLFML3Q9NRN5 406 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 TYW1Q9NV66 732 aaKnown RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 TMEM161AQ9NX61 479 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 SEPT9Q9UHD8 586 aaPredicted RBP9.86□□□□□ -0.83
DDX56-211ENST00000479602 KCNH3Q9ULD8 1083 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 KIAA1024Q9UPX6 916 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 LZTS1Q9Y250 596 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 PCDHB7Q9Y5E2 793 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 PCDHGC5Q9Y5F6 944 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 ZMYM2Q9UBW7 1377 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 MYO15AQ9UKN7 3530 aa9.86□□□□□ -0.83
DDX56-211ENST00000479602 M0QZ92 97 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 PFKFB1P16118 471 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 ATF7P17544 494 aaPredicted RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 DNM2P50570 870 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 AMPD3Q01432 767 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 EHHADHQ08426 723 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 NFX1Q12986 1120 aaKnown RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 KARSQ15046 597 aaKnown RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 DUSP6Q16828 381 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms