RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 CNNM3Q8NE01 707 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 BLZF1Q9H2G9 400 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 SLC28A3Q9HAS3 691 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 KBTBD4Q9NVX7 518 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 USP25Q9UHP3 1055 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 KCNG1Q9UIX4 513 aa16.77■□□□□ 0.28
COL16A1-211ENST00000479100 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.27
COL16A1-211ENST00000479100 ADGRA3Q8IWK6 1321 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-211ENST00000479100 K7ERI5 159 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 ACTN4O43707 911 aaKnown RBP16.76■□□□□ 0.27
COL16A1-211ENST00000479100 ZNF202O95125 648 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 PRKCBP05771 671 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 CASP1P29466 404 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 EFNA5P52803 228 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 MAPK6Q16659 721 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
COL16A1-211ENST00000479100 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 SPIRE2Q8WWL2 714 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 DNAJC19Q96DA6 116 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-211ENST00000479100 PANK4Q9NVE7 773 aa16.76■□□□□ 0.27
COL16A1-211ENST00000479100 PRMT7Q9NVM4 692 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-211ENST00000479100 K7ENM7 598 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 B4GALT5O43286 388 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 TRAK2O60296 914 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 TSPAN1O60635 241 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 GAP43P17677 238 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 ZNF131P52739 623 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 DSC3Q14574 896 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-211ENST00000479100 SFR1Q86XK3 245 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 RNF169Q8NCN4 708 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 GAS2L1Q99501 681 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-211ENST00000479100 C7orf25Q9BPX7 421 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 PRDM6Q9NQX0 595 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 AGPAT5Q9NUQ2 364 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 TBC1D7Q9P0N9 293 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 LRFN2Q9ULH4 789 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 USP20Q9Y2K6 914 aa16.75■□□□□ 0.27
COL16A1-211ENST00000479100 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
COL16A1-211ENST00000479100 FAM160A1Q05DH4 1040 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 STRN3Q13033 797 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
COL16A1-211ENST00000479100 CUL4BQ13620 913 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 PCBP1Q15365 356 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL16A1-211ENST00000479100 AMHR2Q16671 573 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 KRBA2Q6ZNG9 492 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 HERC6Q8IVU3 1022 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 TMEM161BQ8NDZ6 487 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 NTPCRQ9BSD7 190 aaKnown RBP16.74■□□□□ 0.27
COL16A1-211ENST00000479100 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 FZD8Q9H461 694 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 C1orf112Q9NSG2 853 aa16.74■□□□□ 0.27
COL16A1-211ENST00000479100 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 H0YCG3 227 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 ACKR2O00590 384 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 ARHGEF15O94989 841 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 ARF4P18085 180 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 AXLP30530 894 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 SARSP49591 514 aaKnown RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 NCKAP1LP55160 1127 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 UBE2HP62256 183 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 FAM43BQ6ZT52 329 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 CDR2LQ86X02 465 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 FMR1NBQ8N0W7 255 aaPredicted RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 CCDC34Q96HJ3 373 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 PRIMPOLQ96LW4 560 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
COL16A1-211ENST00000479100 ARHGAP28Q9P2N2 729 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 PCDHB7Q9Y5E2 793 aa16.73■□□□□ 0.27
COL16A1-211ENST00000479100 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 MYH11P35749 1972 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 C9IYK1 514 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-211ENST00000479100 TLL1O43897 1013 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 NR1I2O75469 434 aa16.72■□□□□ 0.27
COL16A1-211ENST00000479100 CA3P07451 260 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms