RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	GNPTAB	Q3T906	1256 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	CCDC122	Q5T0U0	273 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	C10orf76	Q5T2E6	689 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	EEPD1	Q7L9B9	569 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	CACNA2D4	Q7Z3S7	1137 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	MAP4K3	Q8IVH8	894 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	GPR161	Q8N6U8	529 aa	Known RBP	10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	MSANTD4	Q8NCY6	345 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	TMEM161B	Q8NDZ6	487 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	LMO3	Q8TAP4	145 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	MORC4	Q8TE76	937 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	KIFAP3	Q92845	792 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	VTI1A	Q96AJ9	217 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	FGD4	Q96M96	766 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	FBXL18	Q96ME1	805 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	ACCS	Q96QU6	501 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	CEP89	Q96ST8	783 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	UNC93B1	Q9H1C4	597 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	TRIM10	Q9UDY6	481 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	TCEAL9	Q9UHQ7	104 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	PCDHA13	Q9Y5I0	950 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	MYH10	P35580	1976 aa		10.43	□□□□□ -0.74
ATG7-223	ENST00000478638	CLIC2	O15247	247 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	USO1	O60763	962 aa	Known RBP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	DGAT1	O75907	488 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	IGHA2	P01877	340 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	PSAP	P07602	524 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	SUPT20HL2	P0C7V6	817 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	CYBA	P13498	195 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	CCND3	P30281	292 aa	Predicted RBP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	ITIH3	Q06033	890 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	KIF5A	Q12840	1032 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	BFSP1	Q12934	665 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	SPA17	Q15506	151 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	C1orf220	Q5T0J3	134 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	MAP3K21	Q5TCX8	1036 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	FBXO38	Q6PIJ6	1188 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	INTS8	Q75QN2	995 aa	Known RBP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	OTUD6A	Q7L8S5	288 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	HAUS6	Q7Z4H7	955 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	KIAA1328	Q86T90	577 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	FMNL3	Q8IVF7	1028 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	MNS1	Q8NEH6	495 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	MCPH1	Q8NEM0	835 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	TRIM58	Q8NG06	486 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	UBXN4	Q92575	508 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	IFIH1	Q9BYX4	1025 aa	Known RBP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	IKZF4	Q9H2S9	585 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	JPH1	Q9HDC5	661 aa	Predicted RBP	10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	VTA1	Q9NP79	307 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	XPNPEP1	Q9NQW7	623 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	PKD2L1	Q9P0L9	805 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	SLC9A2	Q9UBY0	812 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	KCNG1	Q9UIX4	513 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	GUCA1B	Q9UMX6	200 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	PPME1	Q9Y570	386 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638	FHOD1	Q9Y613	1164 aa		10.42	□□□□□ -0.74
ATG7-223	ENST00000478638		K7ENM7	598 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	SEPT4	O43236	478 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	AKR1B10	O60218	316 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	MSC	O60682	206 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	N4BP1	O75113	896 aa	Known RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	PIGR	P01833	764 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	TFRC	P02786	760 aa	Known RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	TGFB3	P10600	412 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	ACTR2	P61160	394 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	CYP27A1	Q02318	531 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	TARBP2	Q15633	366 aa	Known RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	XKR9	Q5GH70	373 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	XKR3	Q5GH77	459 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	IQSEC1	Q6DN90	963 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	SMYD5	Q6GMV2	418 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	SEPT14	Q6ZU15	432 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	TRPV1	Q8NER1	839 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	AFAP1L1	Q8TED9	768 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	GOLGA1	Q92805	767 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	RPGRIP1	Q96KN7	1286 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	DEFB118	Q96PH6	123 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	CRACR2A	Q9BSW2	395 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	NIFK	Q9BYG3	293 aa	Known RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	STK33	Q9BYT3	514 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	POLD4	Q9HCU8	107 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	NLRC4	Q9NPP4	1024 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	ARHGAP28	Q9P2N2	729 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	RAB21	Q9UL25	225 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	INTU	Q9ULD6	942 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	FRMD4B	Q9Y2L6	1034 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	COQ4	Q9Y3A0	265 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	JRKL	Q9Y4A0	524 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638	SAMM50	Q9Y512	469 aa		10.41	□□□□□ -0.74
ATG7-223	ENST00000478638		A0A087X0T9	212 aa		10.4	□□□□□ -0.74
ATG7-223	ENST00000478638		H0YCG3	227 aa		10.4	□□□□□ -0.74
ATG7-223	ENST00000478638	ATP8B1	O43520	1251 aa		10.4	□□□□□ -0.74

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