RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 MAPRE3Q9UPY8 281 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 ZNF536O15090 1300 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 SBNO1A3KN83 1393 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 USP32Q8NFA0 1604 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 CAMTA1Q9Y6Y1 1673 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 PRAG1Q86YV5 1406 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 MAFO75444 373 aaPredicted RBP6.42□□□□□ -1.38
VPS50-214ENST00000477935 RGS3P49796 1198 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 RRADP55042 308 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 ROM1Q03395 351 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 TTC38Q5R3I4 469 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 THNSL2Q86YJ6 484 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 MAML3Q96JK9 1138 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS50-214ENST00000477935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS50-214ENST00000477935 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 SPATA31A1Q5TZJ5 1347 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 GCC2Q8IWJ2 1684 aa6.42□□□□□ -1.38
VPS50-214ENST00000477935 NEXMIFQ5QGS0 1516 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 TGM5O43548 720 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 CNOT4O95628 575 aaKnown RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 ITGB3P05106 788 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 KPNA1P52294 538 aaPredicted RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 EPHB4P54760 987 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 MAP3K12Q12852 859 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 SLFN12LQ6IEE8 588 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 RNF180Q86T96 592 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 DNAJC5GQ8N7S2 189 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 OR2W6PQ8NHA6 318 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 LEO1Q8WVC0 666 aaPredicted RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 GPR101Q96P66 508 aaPredicted RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 TUBGCP5Q96RT8 1024 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 SSBP3Q9BWW4 388 aaPredicted RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 ZMAT4Q9H898 229 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 STK32BQ9NY57 414 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 NALCNQ8IZF0 1738 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 AATKQ6ZMQ8 1374 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 TNS3Q68CZ2 1445 aa6.41□□□□□ -1.38
VPS50-214ENST00000477935 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
VPS50-214ENST00000477935 DLC1Q96QB1 1528 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 TNS1Q9HBL0 1735 aaKnown RBP6.4□□□□□ -1.38
VPS50-214ENST00000477935 B8ZZF3 427 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ADCYAP1R1P41586 468 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 IL2P60568 153 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 SMAD3P84022 425 aaKnown RBP6.4□□□□□ -1.38
VPS50-214ENST00000477935 ADCY1Q08828 1119 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 SLC15A2Q16348 729 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ZNF827Q17R98 1081 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ZNF568Q3ZCX4 644 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ZMAT1Q5H9K5 638 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 PRAMEF9Q5VWM5 478 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS50-214ENST00000477935 PHYKPLQ8IUZ5 450 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 PASD1Q8IV76 773 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ZZZ3Q8IYH5 903 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 BCL6BQ8N143 479 aaPredicted RBP6.4□□□□□ -1.38
VPS50-214ENST00000477935 C7orf31Q8N865 590 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 RTF1Q92541 710 aaKnown RBP6.4□□□□□ -1.38
VPS50-214ENST00000477935 SCYL1Q96KG9 808 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 KIAA1683Q9H0B3 1180 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 JADE2Q9NQC1 790 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 SPTLC3Q9NUV7 552 aa6.4□□□□□ -1.38
VPS50-214ENST00000477935 ANKRD50Q9ULJ7 1429 aa6.4□□□□□ -1.39
VPS50-214ENST00000477935 MYO5BQ9ULV0 1848 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 K7ESM1 405 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 FKBP9O95302 570 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 STAT3P40763 770 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 STAT5BP51692 787 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 OCRLQ01968 901 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 LRRC32Q14392 662 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 MYBPC3Q14896 1274 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 TRIM68Q6AZZ1 485 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 GLB1LQ6UWU2 654 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 FKBP9P1Q75LS8 142 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 LIMS2Q7Z4I7 341 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 PTPN18Q99952 460 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 MEGF9Q9H1U4 602 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 CNOT11Q9UKZ1 510 aaKnown RBP6.39□□□□□ -1.39
VPS50-214ENST00000477935 THRAP3Q9Y2W1 955 aaKnown RBP6.39□□□□□ -1.39
VPS50-214ENST00000477935 NCANO14594 1321 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 GOLGB1Q14789 3259 aaKnown RBP6.39□□□□□ -1.39
VPS50-214ENST00000477935 DAPK1P53355 1430 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 NRKQ7Z2Y5 1582 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 NRXN3Q9Y4C0 1643 aa6.39□□□□□ -1.39
VPS50-214ENST00000477935 PRRG2O14669 202 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 CLSTN1O94985 981 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 CD40P25942 277 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 LSSP48449 732 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 MASP1P48740 699 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 EVA1CP58658 441 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS50-214ENST00000477935 PCOLCEQ15113 449 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 TBR1Q16650 682 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 RNF151Q2KHN1 245 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 EGFLAMQ63HQ2 1017 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms