RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 TMEM253P0C7T8 217 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 CALB2P22676 271 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 TXKP42681 527 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 PLTPP55058 493 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 GALNT15Q8N3T1 639 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 CKAP2Q8WWK9 683 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 SERPINB12Q96P63 405 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 GRHL1Q9NZI5 618 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 CYTH3O43739 400 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 RTN3O95197 1032 aaPredicted RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 LMNB1P20700 586 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 SMARCA1P28370 1054 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 MXRA7P84157 204 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 DPY19L2P1Q6NXN4 242 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 REXO1Q8N1G1 1221 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 PROCA1Q8NCQ7 364 aaPredicted RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 EPS8L3Q8TE67 593 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 INPP5DQ92835 1189 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 TMEM237Q96Q45 408 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 LRMDAQ9H2I8 198 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 PCYOX1Q9UHG3 505 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 PITPNM2Q9BZ72 1349 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 A8MUI8 341 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 AP1G2O75843 785 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 LMNAP02545 664 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 JAM2P57087 298 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 RHBDL3P58872 404 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 EXOC3L4Q17RC7 722 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 C12orf60Q5U649 245 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 ENDOVQ8N8Q3 282 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 ITFG2Q969R8 447 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 NT5C3AQ9H0P0 336 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 VCXQ9H320 206 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 KCTD10Q9H3F6 313 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 ASB3Q9Y575 518 aa16.41■□□□□ 0.22
CLSTN1-205ENST00000477264 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 YDJCA8MPS7 323 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SMIM24O75264 130 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 EYA4O95677 639 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 ALDH3A1P30838 453 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 CRKP46108 304 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■■■■□ 25.3
CLSTN1-205ENST00000477264 PPATQ06203 517 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 HYIQ5T013 277 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 THEMIS2Q5TEJ8 643 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 NUGGCQ68CJ6 796 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 KIF2BQ8N4N8 673 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 FAM167BQ9BTA0 163 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 PSME4Q14997 1843 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 CYP2D6P10635 497 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 GNAT1P11488 350 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 PTGIRP43119 386 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 TFAP4Q01664 338 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 WASHC2DQ5SRD0 308 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 FITM2Q8N6M3 262 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 SNX24Q9Y343 169 aa16.4■□□□□ 0.22
CLSTN1-205ENST00000477264 ZNF646O15015 1829 aaPredicted RBP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 ALAS1P13196 640 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 PCK1P35558 622 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 KLC1Q07866 573 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 ADAM9Q13443 819 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 SPDYAQ5MJ70 313 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 DCAF12L1Q5VU92 463 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 PIGOQ8TEQ8 1089 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 TEKT4Q8WW24 435 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 CTNNBL1Q8WYA6 563 aaPredicted RBP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 TRAPPC9Q96Q05 1148 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 SEMA4AQ9H3S1 761 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 ZNF287Q9HBT7 754 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 ARMCX3Q9UH62 379 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms