RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZSCAN20P17040 1043 aaPredicted RBP4.14□□□□□ -1.75
XRN1-211ENST00000477237 NAT1P18440 290 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 RNASE9P60153 205 aaKnown RBP4.14□□□□□ -1.75
XRN1-211ENST00000477237 SRSF4Q08170 494 aaKnown RBP4.14□□□□□ -1.75
XRN1-211ENST00000477237 ZNF425Q6IV72 752 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 SLC44A3Q8N4M1 653 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 SLC9A6Q92581 669 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 CDC6Q99741 560 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 EPC1Q9H2F5 836 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 COQ6Q9Y2Z9 468 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 SLC12A8A0AV02 714 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 UNCXA6NJT0 531 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 SPDEFO95238 335 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 DDX6P26196 483 aaKnown RBP eCLIP4.13□□□□□ -1.75
XRN1-211ENST00000477237 BLOC1S1P78537 153 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 SIM1P81133 766 aaPredicted RBP4.13□□□□□ -1.75
XRN1-211ENST00000477237 ARID5AQ03989 594 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 SLFN12LQ6IEE8 588 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 OVCH1Q7RTY7 1134 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 BMP8AQ7Z5Y6 402 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 PLXDC1Q8IUK5 500 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 ST13P5Q8NFI4 369 aaPredicted RBP4.13□□□□□ -1.75
XRN1-211ENST00000477237 MAML3Q96JK9 1138 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 ING3Q9NXR8 418 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 ZNF70Q9UC06 446 aaPredicted RBP4.13□□□□□ -1.75
XRN1-211ENST00000477237 MAST3O60307 1309 aa4.13□□□□□ -1.75
XRN1-211ENST00000477237 WDR91A4D1P6 747 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 HIP1RO75146 1068 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 FGRP09769 529 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 SUMO1P63165 101 aaKnown RBP4.12□□□□□ -1.75
XRN1-211ENST00000477237 ZNF169Q14929 603 aaPredicted RBP4.12□□□□□ -1.75
XRN1-211ENST00000477237 FAM209AQ5JX71 171 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 FOXB2Q5VYV0 432 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 CC2D1AQ6P1N0 951 aaPredicted RBP4.12□□□□□ -1.75
XRN1-211ENST00000477237 MCF2L2Q86YR7 1114 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 SYT12Q8IV01 421 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 IPO9Q96P70 1041 aaKnown RBP4.12□□□□□ -1.75
XRN1-211ENST00000477237 ACSS2Q9NR19 701 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 MAP3K2Q9Y2U5 619 aa4.12□□□□□ -1.75
XRN1-211ENST00000477237 TRBV23-1A0A0A0MS06 115 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 ZBTB48P10074 688 aaPredicted RBP4.11□□□□□ -1.75
XRN1-211ENST00000477237 CASRP41180 1078 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 RARRES1P49788 294 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 IRF9Q00978 393 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 NHLH2Q02577 135 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 PDCD4Q53EL6 469 aaKnown RBP4.11□□□□□ -1.75
XRN1-211ENST00000477237 DOK3Q7L591 496 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 XYLT1Q86Y38 959 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 SPATA9Q9BWV2 254 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 CELF4Q9BZC1 486 aaKnown RBP4.11□□□□□ -1.75
XRN1-211ENST00000477237 KMT5AQ9NQR1 393 aa4.11□□□□□ -1.75
XRN1-211ENST00000477237 ADCY3O60266 1144 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 ITGAMP11215 1152 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 FNTBP49356 437 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 GABREP78334 506 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
XRN1-211ENST00000477237 BTNL9Q6UXG8 535 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 GPRIN1Q7Z2K8 1008 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 OR5M3Q8NGP4 307 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 ZBTB9Q96C00 473 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 UIMC1Q96RL1 719 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 HDAC5Q9UQL6 1122 aa4.1□□□□□ -1.75
XRN1-211ENST00000477237 UBA6A0AVT1 1052 aaPredicted RBP4.09□□□□□ -1.75
XRN1-211ENST00000477237 MARCH11A6NNE9 402 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 NRP1O14786 923 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 KLF4O43474 513 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 PROK1P58294 105 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 OCA2Q04671 838 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 SCAPQ12770 1279 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 PRAMEF9Q5VWM5 478 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 CRELD2Q6UXH1 353 aaPredicted RBP4.09□□□□□ -1.75
XRN1-211ENST00000477237 SPATC1Q76KD6 591 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 IL17RAQ96F46 866 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 SOX7Q9BT81 388 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 TRIM55Q9BYV6 548 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 OSBPL6Q9BZF3 934 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 KLK15Q9H2R5 256 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 PFDN2Q9UHV9 154 aa4.09□□□□□ -1.75
XRN1-211ENST00000477237 CCDC85CA6NKD9 419 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 DIRC3C9JPN6 131 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 GAAP10253 952 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 CACNA2D1P54289 1103 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 RESTQ13127 1097 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 MYBPC3Q14896 1274 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 KLHL22Q53GT1 634 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 TTC38Q5R3I4 469 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 FOXJ2Q9P0K8 574 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 RNF181Q9P0P0 153 aa4.08□□□□□ -1.76
XRN1-211ENST00000477237 A0A0A6YYJ9 748 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 PRR5-ARHGAP8B1AHC4 643 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 TRIM38O00635 465 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 EFCAB14O75071 495 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 PROP1O75360 226 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 ALDH1A2O94788 518 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 APPP05067 770 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 HLA-DOAP06340 250 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 WNT3AP56704 352 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 BCAR1P56945 870 aa4.07□□□□□ -1.76
XRN1-211ENST00000477237 DDB1Q16531 1140 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms