RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TEX2Q8IWB9 1127 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 SMG8Q8ND04 991 aaKnown RBP13.44□□□□□ -0.26
HDAC6-219ENST00000476625 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 RIT2Q99578 217 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
HDAC6-219ENST00000476625 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 MIA3Q5JRA6 1907 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC195A0A1B0GUA6 201 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 MED19A0JLT2 244 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-219ENST00000476625 TEX28O15482 410 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 LRRN2O75325 713 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 DCNP07585 359 aaKnown RBP13.43□□□□□ -0.26
HDAC6-219ENST00000476625 SFNP31947 248 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-219ENST00000476625 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC12Q8WUD4 166 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-219ENST00000476625 ACSF2Q96CM8 615 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-219ENST00000476625 CPB2Q96IY4 423 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 ZFP42Q96MM3 310 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 TRAIPQ9BWF2 469 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 RSAD1Q9HA92 442 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 FAN1Q9Y2M0 1017 aa13.43□□□□□ -0.26
HDAC6-219ENST00000476625 FANCMQ8IYD8 2048 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 POTEMA6NI47 508 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 M0R2N6 131 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 STK25O00506 426 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 INPPL1O15357 1258 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 HOXA11P31270 313 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 OR1G1P47890 313 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 RCAN1P53805 252 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 Q4G0T1 1027 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 FAM43BQ6ZT52 329 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 ZNF410Q86VK4 478 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 CDR2LQ86X02 465 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 URGCPQ8TCY9 931 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 ZNF707Q96C28 371 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 HERC2P3Q9BVR0 1158 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-219ENST00000476625 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 COL4A3BPQ9Y5P4 624 aa13.42□□□□□ -0.26
HDAC6-219ENST00000476625 CLUHO75153 1309 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 ZNF623O75123 536 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 PDIA3P30101 505 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 MLH1P40692 756 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 SCNN1GP51170 649 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 USP11P51784 963 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 GIT2Q14161 759 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 KRT32Q14532 448 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 INF2Q27J81 1249 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 KIAA2013Q8IYS2 634 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 DCLK2Q8N568 766 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC148Q8NFR7 591 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 PRPF31Q8WWY3 499 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 FAM193BQ96PV7 902 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 GAD1Q99259 594 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 EMILIN2Q9BXX0 1053 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 TBC1D17Q9HA65 648 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
HDAC6-219ENST00000476625 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
HDAC6-219ENST00000476625 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 A0A087WWV3 80 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 CDC45O75419 566 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 EFEMP2O95967 443 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 SOD2P04179 222 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 GLULP15104 373 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 IFNAR1P17181 557 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 DNM2P50570 870 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 RAB27AP51159 221 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 NTHL1P78549 312 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 LAMTOR4Q0VGL1 99 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 STK3Q13188 491 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 KIAA0319Q5VV43 1072 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 PPFIBP1Q86W92 1011 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-219ENST00000476625 SLC44A3Q8N4M1 653 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms