RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CCDC51Q96ER9 411 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 CCDC34Q96HJ3 373 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 C7orf25Q9BPX7 421 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 GBF1Q92538 1859 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 CNTNAP2Q9UHC6 1331 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 ACKR2O00590 384 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 UPP2O95045 317 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 HOXA11P31270 313 aaPredicted RBP32.55■■■□□ 2.8
HOXB3-208ENST00000476342 AFMP43652 599 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 PRPF4BQ13523 1007 aaKnown RBP32.55■■■□□ 2.8
HOXB3-208ENST00000476342 CNNM4Q6P4Q7 775 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 CLEC17AQ6ZS10 378 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 NPAS4Q8IUM7 802 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 CCDC65Q8IXS2 484 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 TMEM161BQ8NDZ6 487 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 TRAIPQ9BWF2 469 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 LRFN2Q9ULH4 789 aa32.55■■■□□ 2.8
HOXB3-208ENST00000476342 GRXCR1A8MXD5 290 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 K7ENM7 598 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 B4GALT5O43286 388 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 ZNF202O95125 648 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 ARF4P18085 180 aaPredicted RBP32.54■■■□□ 2.8
HOXB3-208ENST00000476342 ABCD1P33897 745 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 RAB27AP51159 221 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 ASIC1P78348 528 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 TMEM132AQ24JP5 1023 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 TMCO2Q7Z6W1 182 aaPredicted RBP32.54■■■□□ 2.8
HOXB3-208ENST00000476342 CNNM3Q8NE01 707 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 CPB2Q96IY4 423 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 PANK4Q9NVE7 773 aa32.54■■■□□ 2.8
HOXB3-208ENST00000476342 A0A0U1RQF3 1178 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 FRMD3A2A2Y4 597 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 SKIP12755 728 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 IBSPP21815 317 aaPredicted RBP32.53■■■□□ 2.8
HOXB3-208ENST00000476342 STRN3Q13033 797 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 RAB30Q15771 203 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 FAM117BQ6P1L5 589 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 SFR1Q86XK3 245 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 ELAC1Q9H777 363 aaKnown RBP32.53■■■□□ 2.8
HOXB3-208ENST00000476342 PCDHB7Q9Y5E2 793 aa32.53■■■□□ 2.8
HOXB3-208ENST00000476342 TLL1O43897 1013 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 MYL1P05976 194 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 MAPTP10636 758 aaKnown RBP32.52■■■□□ 2.8
HOXB3-208ENST00000476342 FAM160A1Q05DH4 1040 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 HERC4Q5GLZ8 1057 aaPredicted RBP32.52■■■□□ 2.8
HOXB3-208ENST00000476342 KRBA2Q6ZNG9 492 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 HAUS6Q7Z4H7 955 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 KCNN1Q92952 543 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 PAGE5Q96GU1 130 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 GBP4Q96PP9 640 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 MSRAQ9UJ68 235 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 PCDHA11Q9Y5I1 949 aa32.52■■■□□ 2.8
HOXB3-208ENST00000476342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.51■■■□□ 2.8
HOXB3-208ENST00000476342 FAM189BP81408 668 aa32.51■■■□□ 2.8
HOXB3-208ENST00000476342 FMR1NBQ8N0W7 255 aaPredicted RBP32.51■■■□□ 2.8
HOXB3-208ENST00000476342 RAD9AQ99638 391 aa32.51■■■□□ 2.8
HOXB3-208ENST00000476342 PBX4Q9BYU1 374 aa32.51■■■□□ 2.8
HOXB3-208ENST00000476342 FAM105AQ9NUU6 356 aa32.51■■■□□ 2.8
HOXB3-208ENST00000476342 TMEM161AQ9NX61 479 aa32.51■■■□□ 2.8
HOXB3-208ENST00000476342 A0A1B0GUA9 196 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 RABGGTBP53611 331 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 KANK3Q6NY19 840 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 ECHDC2Q86YB7 292 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 FIZ1Q96SL8 496 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 MRPL4Q9BYD3 311 aaKnown RBP32.51■■■□□ 2.79
HOXB3-208ENST00000476342 BLZF1Q9H2G9 400 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 OLFML3Q9NRN5 406 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 INSL6Q9Y581 213 aa32.51■■■□□ 2.79
HOXB3-208ENST00000476342 N4BP3O15049 544 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 UBE2HP62256 183 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 SLC27A1Q6PCB7 646 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 TAS1R3Q7RTX0 852 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 GRAMD1CQ8IYS0 662 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 YME1L1Q96TA2 773 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 ST6GALNAC4Q9H4F1 302 aa32.5■■■□□ 2.79
HOXB3-208ENST00000476342 MRPL44Q9H9J2 332 aaKnown RBP32.5■■■□□ 2.79
HOXB3-208ENST00000476342 GADD45BO75293 160 aaPredicted RBP32.49■■■□□ 2.79
HOXB3-208ENST00000476342 EOMESO95936 686 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 COASYQ13057 564 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 CUL4BQ13620 913 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 UNC13DQ70J99 1090 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 CRIPAKQ8N1N5 446 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 ENGASEQ8NFI3 743 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 ADPGKQ9BRR6 497 aa32.49■■■□□ 2.79
HOXB3-208ENST00000476342 TRIM6Q9C030 488 aaPredicted RBP32.49■■■□□ 2.79
HOXB3-208ENST00000476342 ZNF623O75123 536 aa32.48■■■□□ 2.79
HOXB3-208ENST00000476342 PRPF40AO75400 957 aaKnown RBP32.48■■■□□ 2.79
HOXB3-208ENST00000476342 EDN1P05305 212 aa32.48■■■□□ 2.79
HOXB3-208ENST00000476342 DNAJB2P25686 324 aa32.48■■■□□ 2.79
HOXB3-208ENST00000476342 NMT1P30419 496 aaKnown RBP32.48■■■□□ 2.79
HOXB3-208ENST00000476342 HTRA4P83105 476 aaPredicted RBP32.48■■■□□ 2.79
HOXB3-208ENST00000476342 SNW1Q13573 536 aaKnown RBP32.48■■■□□ 2.79
HOXB3-208ENST00000476342 ATF7IP2Q5U623 682 aa32.48■■■□□ 2.79
HOXB3-208ENST00000476342 PCDHB2Q9Y5E7 798 aa32.48■■■□□ 2.79
HOXB3-208ENST00000476342 PVALEFA0A1B0GWK0 134 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 SOX1O00570 391 aaPredicted RBP32.47■■■□□ 2.79
HOXB3-208ENST00000476342 HOXA2O43364 376 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 GTPBP6O43824 516 aaPredicted RBP32.47■■■□□ 2.79
HOXB3-208ENST00000476342 CASP1P29466 404 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 PBX2P40425 430 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms