RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 DHX33Q9H6R0 707 aaKnown RBP20.39■□□□□ 0.85
HDAC10-210ENST00000475965 USTQ9Y2C2 406 aa20.39■□□□□ 0.85
HDAC10-210ENST00000475965 PTPN14Q15678 1187 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 PPP4R3AQ6IN85 833 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 KANK3Q6NY19 840 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 AGMOQ6ZNB7 445 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 ZNF280BQ86YH2 543 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 PLCD3Q8N3E9 789 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 ZNF579Q8NAF0 562 aaKnown RBP20.38■□□□□ 0.85
HDAC10-210ENST00000475965 PRPF31Q8WWY3 499 aaKnown RBP20.38■□□□□ 0.85
HDAC10-210ENST00000475965 TMEM143Q96AN5 459 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 FAM193BQ96PV7 902 aaPredicted RBP20.38■□□□□ 0.85
HDAC10-210ENST00000475965 VN1R3Q9BXE9 311 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 SFXN1Q9H9B4 322 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 RSAD1Q9HA92 442 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 FAM86C1Q9NVL1 165 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 PLXNA3P51805 1871 aa20.38■□□□□ 0.85
HDAC10-210ENST00000475965 DMDP11532 3685 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 SPDYE4A6NLX3 237 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 TBX3O15119 743 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 GAS2O43903 313 aaKnown RBP20.37■□□□□ 0.85
HDAC10-210ENST00000475965 B4GALT3O60512 393 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 SRGAP2CP0DJJ0 459 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 XBP1P17861 261 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 LAMTOR4Q0VGL1 99 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 TMC5Q6UXY8 1006 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
HDAC10-210ENST00000475965 TCP11Q8WWU5 503 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 NAP1L4Q99733 375 aaKnown RBP20.37■□□□□ 0.85
HDAC10-210ENST00000475965 LXNQ9BS40 222 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 EMILIN2Q9BXX0 1053 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 MINDY3Q9H8M7 445 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
HDAC10-210ENST00000475965 WRAP73Q9P2S5 460 aaPredicted RBP20.37■□□□□ 0.85
HDAC10-210ENST00000475965 STK36Q9NRP7 1315 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 WDR87Q6ZQQ6 2873 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 ST18O60284 1047 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 MARCH6O60337 910 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 CCNT1O60563 726 aaKnown RBP20.36■□□□□ 0.85
HDAC10-210ENST00000475965 ASGR2P07307 311 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 EMC2Q15006 297 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 EPHA7Q15375 998 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 OTUD6AQ7L8S5 288 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 C4orf19Q8IY42 314 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 ATOH1Q92858 354 aaPredicted RBP20.36■□□□□ 0.85
HDAC10-210ENST00000475965 TMEM175Q9BSA9 504 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 BMP2KQ9NSY1 1161 aaPredicted RBP20.36■□□□□ 0.85
HDAC10-210ENST00000475965 LIMD1Q9UGP4 676 aa20.36■□□□□ 0.85
HDAC10-210ENST00000475965 ASAP2O43150 1006 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 GALR2O43603 387 aaPredicted RBP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 DDHD2O94830 711 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 ALDH2P05091 517 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 SSBP05455 408 aaKnown RBP eCLIP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 KLRC2P26717 231 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 HOXA11P31270 313 aaPredicted RBP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 YWHABP31946 246 aaKnown RBP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 UBXN11Q5T124 520 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 PIK3AP1Q6ZUJ8 805 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 ACSF2Q96CM8 615 aaPredicted RBP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 SMOC2Q9H3U7 446 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 MRPL17Q9NRX2 175 aaKnown RBP20.35■□□□□ 0.85
HDAC10-210ENST00000475965 FAN1Q9Y2M0 1017 aa20.35■□□□□ 0.85
HDAC10-210ENST00000475965 SPTBN4Q9H254 2564 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 MTCL1Q9Y4B5 1905 aaKnown RBP20.34■□□□□ 0.85
HDAC10-210ENST00000475965 GFRA3O60609 400 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 ERLIN2O94905 339 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 POMCP01189 267 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 CNPP09543 421 aaKnown RBP20.34■□□□□ 0.85
HDAC10-210ENST00000475965 NCLP19338 710 aaKnown RBP20.34■□□□□ 0.85
HDAC10-210ENST00000475965 CLCN4P51793 760 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 AFF1P51825 1210 aaKnown RBP20.34■□□□□ 0.85
HDAC10-210ENST00000475965 SCRN1Q12765 414 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 NCAPH2Q6IBW4 605 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 CCDC149Q6ZUS6 474 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 GPR149Q86SP6 731 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 FERMT3Q86UX7 667 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 RNF149Q8NC42 400 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 CNNM3Q8NE01 707 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 HAS1Q92839 578 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 KLHL5Q96PQ7 755 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 ZSWIM4Q9H7M6 989 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 UBN1Q9NPG3 1134 aa20.34■□□□□ 0.85
HDAC10-210ENST00000475965 H0Y858 1186 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 NRP1O14786 923 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 XKR9Q5GH70 373 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 SLFN12Q8IYM2 578 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 TMEM105Q8N8V8 129 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 DYDC2Q96IM9 177 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 MTRQ99707 1265 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 MFSD1Q9H3U5 465 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 RGL1Q9NZL6 768 aa20.33■□□□□ 0.85
HDAC10-210ENST00000475965 RIF1Q5UIP0 2472 aaKnown RBP20.33■□□□□ 0.84
HDAC10-210ENST00000475965 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
HDAC10-210ENST00000475965 SOD2P04179 222 aa20.32■□□□□ 0.84
HDAC10-210ENST00000475965 URODP06132 367 aa20.32■□□□□ 0.84
HDAC10-210ENST00000475965 ITGA4P13612 1032 aa20.32■□□□□ 0.84
HDAC10-210ENST00000475965 CYP4A11Q02928 519 aa20.32■□□□□ 0.84
HDAC10-210ENST00000475965 PCBP1Q15365 356 aaKnown RBP eCLIP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms