RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 CCDC150Q8NCX0 1101 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 IQCDQ96DY2 449 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 PCMTD1Q96MG8 357 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 TMEM134Q9H6X4 195 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 DDX20Q9UHI6 824 aaKnown RBP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 A0A1W2PQC6 194 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
MRPL55-227ENST00000475832 KIAA0391O15091 583 aaKnown RBP13.38□□□□□ -0.27
MRPL55-227ENST00000475832 CLIC2O15247 247 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 TGFB1I1O43294 461 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 C22orf31O95567 290 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 BMP8BP34820 402 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 HOXD13P35453 343 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 PHKA2P46019 1235 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 PSEN2P49810 448 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 LIG4P49917 911 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 KCNA1Q09470 495 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 LAMTOR4Q0VGL1 99 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 GRIK4Q16099 956 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 GNASQ5JWF2 1037 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 SLFN12LQ6IEE8 588 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 MTHFD1LQ6UB35 978 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 CCDC186Q7Z3E2 898 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 BSNDQ8WZ55 320 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 KCNN1Q92952 543 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-227ENST00000475832 NDST4Q9H3R1 872 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
MRPL55-227ENST00000475832 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 ZBTB42B2RXF5 422 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 ADCY6O43306 1168 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 SRGAP2CP0DJJ0 459 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 PTGS1P23219 599 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 SFPQP23246 707 aaKnown RBP eCLIP13.37□□□□□ -0.27
MRPL55-227ENST00000475832 CYP2J2P51589 502 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 CAPSQ13938 189 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 MAPK6Q16659 721 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
MRPL55-227ENST00000475832 RHPN2Q8IUC4 686 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 KSR1Q8IVT5 923 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 LRRC71Q8N4P6 559 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
MRPL55-227ENST00000475832 KIAA1586Q9HCI6 787 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 VCANP13611 3396 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 DOCK5Q9H7D0 1870 aa13.37□□□□□ -0.27
MRPL55-227ENST00000475832 MCM3APO60318 1980 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 MAPK13O15264 365 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 STX10O60499 249 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 GARTP22102 1010 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
MRPL55-227ENST00000475832 BEX3Q00994 111 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
MRPL55-227ENST00000475832 RNF180Q86T96 592 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 PCSK9Q8NBP7 692 aaKnown RBP13.36□□□□□ -0.27
MRPL55-227ENST00000475832 RNF149Q8NC42 400 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 LENG1Q96BZ8 264 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-227ENST00000475832 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 MRPL4Q9BYD3 311 aaKnown RBP13.36□□□□□ -0.27
MRPL55-227ENST00000475832 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
MRPL55-227ENST00000475832 C17orf102A2RUQ5 167 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 TEX33O43247 280 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 LDHAP00338 332 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 PIGRP01833 764 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 RPLP2P05387 115 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 COL6A1P12109 1028 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 MSNP26038 577 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 CLCN3P51790 818 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 NKX3-2P78367 333 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 NCBP1Q09161 790 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 CETN1Q12798 172 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 CDCA2Q69YH5 1023 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms