RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 DDX42Q86XP3 938 aaKnown RBP eCLIP15.26■□□□□ 0.03
UBXN11-214ENST00000475591 ZNF280CQ8ND82 737 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 ACTRT1Q8TDG2 376 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 SEMA4DQ92854 862 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 AGPAT1Q99943 283 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 SUCLA2Q9P2R7 463 aaPredicted RBP15.26■□□□□ 0.03
UBXN11-214ENST00000475591 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 COL11A1P12107 1806 aaPredicted RBP15.26■□□□□ 0.03
UBXN11-214ENST00000475591 NCANO14594 1321 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 PFASO15067 1338 aa15.26■□□□□ 0.03
UBXN11-214ENST00000475591 PGRMC1O00264 195 aaKnown RBP15.25■□□□□ 0.03
UBXN11-214ENST00000475591 CES2O00748 559 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 PEX10O60683 326 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 MXI1P50539 228 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ERVK-9P63128 1117 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 TMEM132BQ14DG7 1078 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ZSCAN26Q16670 478 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 DCAF12L1Q5VU92 463 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 TAF3Q5VWG9 929 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 C12orf56Q8IXR9 622 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 HES6Q96HZ4 224 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 MOV10L1Q9BXT6 1211 aaKnown RBP15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ZNF214Q9UL59 606 aaPredicted RBP15.25■□□□□ 0.03
UBXN11-214ENST00000475591 USP20Q9Y2K6 914 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 PARP14Q460N5 1801 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ZNF541Q9H0D2 1346 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 DENND3A2RUS2 1198 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 SGPL1O95470 568 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 CCND2P30279 289 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 SFNP31947 248 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 PPATQ06203 517 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 PRKG1Q13976 671 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 SNRNP35Q16560 246 aaKnown RBP15.25■□□□□ 0.03
UBXN11-214ENST00000475591 NAA35Q5VZE5 725 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 SLC39A4Q6P5W5 647 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 LMBR1Q8WVP7 490 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ARL8AQ96BM9 186 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 CEP170P1Q96L14 293 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ZIM3Q96PE6 472 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.032e-7■■■□□ 17.2
UBXN11-214ENST00000475591 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 NR2E1Q9Y466 385 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 DOCK5Q9H7D0 1870 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 ATP8B3O60423 1300 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
UBXN11-214ENST00000475591 KRIT1O00522 736 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 KCNA2P16389 499 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 SWSAP1Q6NVH7 229 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 ADAT2Q7Z6V5 191 aaKnown RBP15.24■□□□□ 0.03
UBXN11-214ENST00000475591 RPUSD2Q8IZ73 545 aaKnown RBP15.24■□□□□ 0.03
UBXN11-214ENST00000475591 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 KREMEN1Q96MU8 473 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 ST6GALNAC4Q9H4F1 302 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 PICK1Q9NRD5 415 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 ANKEF1Q9NU02 776 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 PCDHA10Q9Y5I2 948 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 SART1O43290 800 aaKnown RBP15.24■□□□□ 0.03
UBXN11-214ENST00000475591 CNGA1P29973 690 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 COPB2P35606 906 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 ACTN2P35609 894 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 PAK2Q13177 524 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
UBXN11-214ENST00000475591 FOXR1Q6PIV2 292 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 PPM1KQ8N3J5 372 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
UBXN11-214ENST00000475591 PCDHB18PQ96TA0 734 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 RLFQ13129 1914 aa15.24■□□□□ 0.03
UBXN11-214ENST00000475591 GOLGA6CA6NDK9 693 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 DDX3YO15523 660 aaKnown RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 STBD1O95210 358 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 KRT14P02533 472 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 GOLGA6DP0CG33 693 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 DSG3P32926 999 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 ZNF211Q13398 564 aaPredicted RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 TTMPQ5BVD1 217 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 RASGEF1CQ8N431 466 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 GOLGA6AQ9NYA3 693 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 AMACRQ9UHK6 382 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CYP26A1O43174 497 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CALCAP01258 141 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 FTLP02792 175 aaPredicted RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CCDC172P0C7W6 258 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 ECHS1P30084 290 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CETN1Q12798 172 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 DCAF15Q66K64 600 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 NOP9Q86U38 636 aaKnown RBP15.23■□□□□ 0.03
UBXN11-214ENST00000475591 SLC47A2Q86VL8 602 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 PIK3R5Q8WYR1 880 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 SH3GL2Q99962 352 aa15.23■□□□□ 0.03
UBXN11-214ENST00000475591 CELF4Q9BZC1 486 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms