RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 RNF169Q8NCN4 708 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 PIGOQ8TEQ8 1089 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 UBE2ZQ9H832 354 aaPredicted RBP12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 TYW1Q9NV66 732 aaKnown RBP12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 DBR1Q9UK59 544 aaKnown RBP12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 TTC3P53804 2025 aa12.77□□□□□ -0.37
HLA-DOB-208ENST00000475235 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 MED24O75448 989 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 ITGB1P05556 798 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 PDIA5Q14554 519 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 CASD1Q96PB1 797 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 NFKBIZQ9BYH8 718 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
HLA-DOB-208ENST00000475235 CARNS1A5YM72 827 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 ZNF623O75123 536 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 ERLIN2O94905 339 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 BMP1P13497 986 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 AXLP30530 894 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PPM1AP35813 382 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 ARL2P36404 184 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PRPHP41219 470 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PTENP60484 403 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PTGDRQ13258 359 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 THNSL1Q8IYQ7 743 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 CACTIN-AS1Q8N1I8 211 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 POF1BQ8WVV4 589 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 BACH2Q9BYV9 841 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 CWH43Q9H720 699 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 RNF19AQ9NV58 838 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
HLA-DOB-208ENST00000475235 ATF7P17544 494 aaPredicted RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 SCP2P22307 547 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 KCNQ1P51787 676 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 LEXMQ3ZCV2 418 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 CLLU1OSQ5K130 101 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 GLB1LQ6UWU2 654 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 DTHD1Q6ZMT9 781 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 KRBA2Q6ZNG9 492 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 COLGALT1Q8NBJ5 622 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 CNNM3Q8NE01 707 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 PUF60Q9UHX1 559 aaKnown RBP12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 XIRP2A4UGR9 3374 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
HLA-DOB-208ENST00000475235 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 FGF18O76093 207 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 KCNA5P22460 613 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 GLRA2P23416 452 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 CAPSQ13938 189 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 CAMK1Q14012 370 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 PDE12Q6L8Q7 609 aaKnown RBP12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 HELQQ8TDG4 1101 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 SNX29Q8TEQ0 813 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 LZTS1Q9Y250 596 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 CNTNAP2Q9UHC6 1331 aa12.73□□□□□ -0.37
HLA-DOB-208ENST00000475235 VCANP13611 3396 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms