RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 RIOX1Q9H6W3 641 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC93-208ENST00000474546 WHRNQ9P202 907 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 SALL4Q9UJQ4 1053 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 TFR2Q9UP52 801 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 BAZ2AQ9UIF9 1905 aaKnown RBP8.64□□□□□ -1.03
CCDC93-208ENST00000474546 CACNA1BQ00975 2339 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ZNF536O15090 1300 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 CCDC189A1A4V9 331 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 EPHB6O15197 1021 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 TLR2O60603 784 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 COBLO75128 1261 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MTA2O94776 668 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 OAS1P00973 400 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 FGGP02679 453 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 CLTAP09496 248 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ITIH2P19823 946 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 NR2F2P24468 414 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 HIBADHP31937 336 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 TXKP42681 527 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 NOVP48745 357 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 JAM2P57087 298 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 SNRPFP62306 86 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 IL9RQ01113 521 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 POU5F1Q01860 360 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MECOMQ03112 1051 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 CYP1B1Q16678 543 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 KNOP1Q1ED39 458 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 GALNTL6Q49A17 601 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 INTS8Q75QN2 995 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 SPATA21Q7Z572 469 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 SDCCAG8Q86SQ7 713 aaPredicted RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MFN1Q8IWA4 741 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ARHGAP24Q8N264 748 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD13CQ8N6S4 541 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 HELBQ8NG08 1087 aaPredicted RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MAFAQ8NHW3 353 aaPredicted RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 TBC1D16Q8TBP0 767 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 HPS3Q969F9 1004 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MAGEB18Q96M61 343 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MMTAG2Q9BU76 263 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 CFHR5Q9BXR6 569 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 FAM192AQ9GZU8 254 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 DDX47Q9H0S4 455 aaKnown RBP8.63□□□□□ -1.03
CCDC93-208ENST00000474546 KCTD10Q9H3F6 313 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 ZDHHC18Q9NUE0 388 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 PGAP2Q9UHJ9 254 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 AMACRQ9UHK6 382 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 PCDHA12Q9UN75 941 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 PTPN22Q9Y2R2 807 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 NAV1Q8NEY1 1877 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 BDP1A6H8Y1 2624 aa8.63□□□□□ -1.03
CCDC93-208ENST00000474546 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 hCG_1642624A0A1W2PR95 340 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 KLHL33A6NCF5 533 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 PP2D1A8MPX8 630 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 F8W031 263 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 MAPK13O15264 365 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TTI1O43156 1089 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TBCAO75347 108 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 NPTXRO95502 500 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 NTSR2O95665 410 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 GAS8O95995 478 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 FOSP01100 380 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 ATP5BP06576 529 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 LDHBP07195 334 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 PDHBP11177 359 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 RASA1P20936 1047 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TMOD1P28289 359 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 SOX5P35711 763 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 PSMC2P35998 433 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 CETN2P41208 172 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 MSH2P43246 934 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 SCNN1DP51172 638 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 STAT4Q14765 748 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 RGS9BPQ6ZS82 235 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 BZW1Q7L1Q6 419 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 HS2ST1Q7LGA3 356 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 JAMLQ86YT9 394 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TMEM174Q8WUU8 243 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 DNAJC19Q96DA6 116 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 SPDL1Q96EA4 605 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 ZNF333Q96JL9 665 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 FAM210AQ96ND0 272 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms