RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ZC3H11AO75152 810 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLIC3-201ENST00000473911 RARRES1P49788 294 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 BCAR1P56945 870 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
CLIC3-201ENST00000473911 NCBP1Q09161 790 aaKnown RBP17.32■□□□□ 0.36
CLIC3-201ENST00000473911 NOMO2Q5JPE7 1267 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 SMRP1Q8NCR6 262 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 CDCA3Q99618 268 aaPredicted RBP17.32■□□□□ 0.36
CLIC3-201ENST00000473911 TUFT1Q9NNX1 390 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 NT5C1B-RDH14C9J2C7 533 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 ZNF623O75123 536 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLIC3-201ENST00000473911 CA8P35219 290 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 PTENP60484 403 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 IER5LQ5T953 404 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 CATSPER3Q86XQ3 398 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 SLC39A11Q8N1S5 342 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 ASAP3Q8TDY4 903 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 TMEM169Q96HH4 297 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 POLR3FQ9H1D9 316 aaPredicted RBP17.31■□□□□ 0.36
CLIC3-201ENST00000473911 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
CLIC3-201ENST00000473911 USP15Q9Y4E8 981 aaPredicted RBP17.31■□□□□ 0.36
CLIC3-201ENST00000473911 ZDBF2Q9HCK1 2354 aa17.31■□□□□ 0.36
CLIC3-201ENST00000473911 MEIS3P2A8K0S8 358 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 LOC730098B7Z3J9 87 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 MED24O75448 989 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 OFD1O75665 1012 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 SRGAP2BP0DMP2 458 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
CLIC3-201ENST00000473911 ARL2P36404 184 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 COASYQ13057 564 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 CAPSQ13938 189 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 BMS1Q14692 1282 aaKnown RBP17.3■□□□□ 0.36
CLIC3-201ENST00000473911 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLIC3-201ENST00000473911 DUSP6Q16828 381 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 EDAQ92838 391 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 POLR3CQ9BUI4 534 aaPredicted RBP17.3■□□□□ 0.36
CLIC3-201ENST00000473911 TBC1D13Q9NVG8 400 aa17.3■□□□□ 0.36
CLIC3-201ENST00000473911 CNTNAP2Q9UHC6 1331 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 CARNS1A5YM72 827 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 TSPAN1O60635 241 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 GLRA2P23416 452 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 AXLP30530 894 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 NBR1Q14596 966 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
CLIC3-201ENST00000473911 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 HAUS3Q68CZ6 603 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 NOTUMQ6P988 496 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
CLIC3-201ENST00000473911 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 PRSS33Q8NF86 280 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 CPB2Q96IY4 423 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
CLIC3-201ENST00000473911 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
CLIC3-201ENST00000473911 DBR1Q9UK59 544 aaKnown RBP17.29■□□□□ 0.36
CLIC3-201ENST00000473911 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 ITGA4P13612 1032 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLIC3-201ENST00000473911 RPA1P27694 616 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 LLGL2Q6P1M3 1020 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 AGMOQ6ZNB7 445 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 IFNLR1Q8IU57 520 aaPredicted RBP17.28■□□□□ 0.36
CLIC3-201ENST00000473911 TMEM87AQ8NBN3 555 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 CCDC51Q96ER9 411 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 FAM193BQ96PV7 902 aaPredicted RBP17.28■□□□□ 0.36
CLIC3-201ENST00000473911 TRIM6Q9C030 488 aaPredicted RBP17.28■□□□□ 0.36
CLIC3-201ENST00000473911 NRDE2Q9H7Z3 1164 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 UBN1Q9NPG3 1134 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 CDH22Q9UJ99 828 aa17.28■□□□□ 0.36
CLIC3-201ENST00000473911 TMEM221A6NGB7 291 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 M0R296 226 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
CLIC3-201ENST00000473911 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.36
CLIC3-201ENST00000473911 ZXDAP98168 799 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
CLIC3-201ENST00000473911 TRIM67Q6ZTA4 783 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 APOL5Q9BWW9 433 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
CLIC3-201ENST00000473911 NFKBIZQ9BYH8 718 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 RAB34Q9BZG1 259 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 KANSL3Q9P2N6 904 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms