RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 C7orf31Q8N865 590 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 GOLGA5Q8TBA6 731 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 FDXACB1Q9BRP7 624 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 CCDC113Q9H0I3 377 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 GINS2Q9Y248 185 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 B4GALT5O43286 388 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 GNA14O95837 355 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 TPM2P07951 284 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 CYP2C9P11712 490 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 PBX1P40424 430 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 TFDP1Q14186 410 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 TCERG1LQ5VWI1 586 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 SPECC1LQ69YQ0 1117 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 CCSAPQ6IQ19 270 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 ZBTB8OSQ8IWT0 167 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 MAP7D2Q96T17 732 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
PCCB-211ENST00000473073 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
PCCB-211ENST00000473073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCCB-211ENST00000473073 MKI67P46013 3256 aaKnown RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 C17orf102A2RUQ5 167 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 MSCO60682 206 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 PRKCBP05771 671 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 TRIM49P0CI25 452 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 TRIM49CP0CI26 452 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 HARSP12081 509 aaKnown RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 PRMT2P55345 433 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.21
PCCB-211ENST00000473073 ADAM17P78536 824 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 FAM47CQ5HY64 1035 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 DNAJB3Q8WWF6 145 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 KCNG1Q9UIX4 513 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
PCCB-211ENST00000473073 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 ZEB2O60315 1214 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 ADRB2P07550 413 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 FGFR4P22455 802 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCCB-211ENST00000473073 GPC3P51654 580 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 PTENP60484 403 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 LRMPQ12912 555 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 SYCP1Q15431 976 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 MAPK6Q16659 721 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 LHX8Q68G74 356 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 XXYLT1Q8NBI6 393 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 CPLX3Q8WVH0 158 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 ASAP2O43150 1006 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 KPNA6O60684 536 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 EFNA5P52803 228 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 DLG4P78352 724 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 NKX3-2P78367 333 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 MTFR1Q15390 333 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 GDF6Q6KF10 455 aaPredicted RBP13.76□□□□□ -0.21
PCCB-211ENST00000473073 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
PCCB-211ENST00000473073 GRIN2DO15399 1336 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 CST5P28325 142 aaPredicted RBP13.75□□□□□ -0.21
PCCB-211ENST00000473073 PHKA2P46019 1235 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 ADKP55263 362 aaKnown RBP13.75□□□□□ -0.21
PCCB-211ENST00000473073 APBA1Q02410 837 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
PCCB-211ENST00000473073 ZBTB41Q5SVQ8 909 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 RNF180Q86T96 592 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
PCCB-211ENST00000473073 CACTINQ8WUQ7 758 aaKnown RBP13.75□□□□□ -0.21
PCCB-211ENST00000473073 SLC35C1Q96A29 364 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms