RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NTRK1P04629 796 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 GSNP06396 782 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 FAM87AP0C7U9 286 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PEPDP12955 493 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 GSPT1P15170 499 aaKnown RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 PAMP19021 973 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 HDCP19113 662 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 FPR1P21462 350 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 AKAP5P24588 427 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 HTRA4P83105 476 aaPredicted RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 APBA1Q02410 837 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 STARD3Q14849 445 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KRT72Q14CN4 511 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ATP2B3Q16720 1220 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 HAUS3Q68CZ6 603 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 USP49Q70CQ1 688 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ZNF765Q7L2R6 523 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 DRC7Q8IY82 874 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KRT78Q8N1N4 520 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ASB15Q8WXK1 588 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 WNT8BQ93098 351 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PTCHD1Q96NR3 888 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 NAP1L5Q96NT1 182 aaPredicted RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 KRTAP17-1Q9BYP8 105 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 SUGCTQ9HAC7 445 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 IFT122Q9HBG6 1241 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KMT5AQ9NQR1 393 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ZNF69Q9UC07 566 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 H3BUI4 141 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 DOK2O60496 412 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PRPF6O94906 941 aaKnown RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 FLT3LGP49771 235 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 SUMO3P55854 103 aaPredicted RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 NFIAQ12857 509 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 MALLQ13021 153 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PPFIA1Q13136 1202 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 LSAMPQ13449 338 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 CNGB1Q14028 1251 aaPredicted RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 NOLC1Q14978 699 aaKnown RBP eCLIP3.15□□□□□ -1.91
XRN1-210ENST00000472697 SLC14A2Q15849 920 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 NKPD1Q17RQ9 610 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 FKBP15Q5T1M5 1219 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PRAMEF9Q5VWM5 478 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 MBNL2Q5VZF2 373 aaKnown RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 FAM205BPQ63HN1 556 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 FDX2Q6P4F2 183 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 SLC22A25Q6T423 547 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 RSPO2Q6UXX9 243 aaPredicted RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 FRMD7Q6ZUT3 714 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ADGRG2Q8IZP9 1017 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 EDARADDQ8WWZ3 215 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 STON2Q8WXE9 905 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 APIPQ96GX9 242 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 SEC62Q99442 399 aaKnown RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 C1orf43Q9BWL3 253 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 ASPNQ9BXN1 380 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 RNF208Q9H0X6 261 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 DHX36Q9H2U1 1008 aaKnown RBP3.15□□□□□ -1.91
XRN1-210ENST00000472697 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.15□□□□□ -1.91
XRN1-210ENST00000472697 MAN2B2Q9Y2E5 1009 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 STXBP5LQ9Y2K9 1186 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 KIF21BO75037 1637 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 FGD5Q6ZNL6 1462 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 FHAD1B1AJZ9 1412 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 PTPRTO14522 1441 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 A0A1W2PPC4 97 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 A6NLC8 198 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 FAM170BA6NMN3 283 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 H3BS24 57 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 N4BP3O15049 544 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 BUB1BO60566 1050 aaPredicted RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 TADA3O75528 432 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 SBK3P0C264 359 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 U2AF1L5P0DN76 240 aaPredicted RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 BRAFP15056 766 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 GLB1P16278 677 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 RPL10P27635 214 aaKnown RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 BMP8BP34820 402 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 ALDH9A1P49189 494 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 GSK3AP49840 483 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 CCR5P51681 352 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 U2AF1Q01081 240 aaKnown RBP eCLIP3.14□□□□□ -1.91
XRN1-210ENST00000472697 POU5F1Q01860 360 aaKnown RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 TARDBPQ13148 414 aaKnown RBP eCLIP3.14□□□□□ -1.91
XRN1-210ENST00000472697 CUL4BQ13620 913 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 ADRM1Q16186 407 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 ARL13BQ3SXY8 428 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 SV2AQ7L0J3 742 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 SPATA5Q8NB90 893 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 NAXEQ8NCW5 288 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 ANKS1AQ92625 1134 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 DLG3Q92796 817 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 RPGRQ92834 1020 aaKnown RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 LIN37Q96GY3 246 aaPredicted RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 BTBD6Q96KE9 485 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 ZFYVE21Q9BQ24 234 aa3.14□□□□□ -1.91
XRN1-210ENST00000472697 TRIT1Q9H3H1 467 aaKnown RBP3.14□□□□□ -1.91
XRN1-210ENST00000472697 MTG2Q9H4K7 406 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms