RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 MCPH1Q8NEM0 835 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 PIN4Q9Y237 131 aaKnown RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 ADGRA3Q8IWK6 1321 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 E9PMD0 336 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 GFRA3O60609 400 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 LTBRP36941 435 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
CLRN1-205ENST00000472224 GRIN1Q05586 938 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 CAPSQ13938 189 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 BECN1Q14457 450 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
CLRN1-205ENST00000472224 TCEAL5Q5H9L2 206 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 KCNK18Q7Z418 384 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 CABP7Q86V35 215 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
CLRN1-205ENST00000472224 ASAP2O43150 1006 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 ERLIN2O94905 339 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 EYA4O95677 639 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 F13A1P00488 732 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 ZSCAN22P10073 491 aaPredicted RBP13.15□□□□□ -0.3
CLRN1-205ENST00000472224 CYP11B2P19099 503 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 GLRA2P23416 452 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 UBA7P41226 1012 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 GATMP50440 423 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
CLRN1-205ENST00000472224 PKP1Q13835 747 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 DSC3Q14574 896 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 STK38Q15208 465 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
CLRN1-205ENST00000472224 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 BMP8AQ7Z5Y6 402 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 EDAQ92838 391 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 ZNF396Q96N95 335 aaPredicted RBP13.15□□□□□ -0.3
CLRN1-205ENST00000472224 PNMA5Q96PV4 448 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 TCHHQ07283 1943 aa13.15□□□□□ -0.3
CLRN1-205ENST00000472224 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 C9IYK1 514 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 FGFR1P11362 822 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 LIG1P18858 919 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 CTNNB1P35222 781 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 ARL2P36404 184 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 LONP1P36776 959 aaKnown RBP13.14□□□□□ -0.31
CLRN1-205ENST00000472224 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
CLRN1-205ENST00000472224 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
CLRN1-205ENST00000472224 PTPAQ15257 358 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 SMAD2Q15796 467 aaKnown RBP13.14□□□□□ -0.31
CLRN1-205ENST00000472224 TIGD5Q53EQ6 642 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 AK8Q96MA6 479 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
CLRN1-205ENST00000472224 MYO7AQ13402 2215 aa13.14□□□□□ -0.31
CLRN1-205ENST00000472224 HIP1RO75146 1068 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 DGKIO75912 1065 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 CSPG5O95196 566 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 PLCG1P19174 1290 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 TXLNAP40222 546 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
CLRN1-205ENST00000472224 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
CLRN1-205ENST00000472224 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 RUSC1Q9BVN2 902 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
CLRN1-205ENST00000472224 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
CLRN1-205ENST00000472224 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
CLRN1-205ENST00000472224 FAM50BQ9Y247 325 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms