RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 RNF168Q8IYW5 571 aaPredicted RBP22.22■■□□□ 1.15
CCDC78-208ENST00000471861 PHKBQ93100 1093 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 ZNF707Q96C28 371 aaPredicted RBP22.22■■□□□ 1.15
CCDC78-208ENST00000471861 TMEM175Q9BSA9 504 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 HERC2P3Q9BVR0 1158 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 RHOBTB2Q9BYZ6 727 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 SEMA4AQ9H3S1 761 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 RSAD1Q9HA92 442 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 MRPL17Q9NRX2 175 aaKnown RBP22.22■■□□□ 1.15
CCDC78-208ENST00000471861 NAP1L2Q9ULW6 460 aaPredicted RBP22.22■■□□□ 1.15
CCDC78-208ENST00000471861 NCOR2Q9Y618 2525 aa22.22■■□□□ 1.15
CCDC78-208ENST00000471861 CCDC195A0A1B0GUA6 201 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 INPPL1O15357 1258 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 TEX28O15482 410 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 PRPF3O43395 683 aaKnown RBP22.21■■□□□ 1.15
CCDC78-208ENST00000471861 EFEMP2O95967 443 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 DCNP07585 359 aaKnown RBP22.21■■□□□ 1.15
CCDC78-208ENST00000471861 SRFP11831 508 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 CPA1P15085 419 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 PLA2G4FQ68DD2 849 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 MIER3Q7Z3K6 550 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 RDM1Q8NG50 284 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 URGCPQ8TCY9 931 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 GPR152Q8TDT2 470 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 PGBD4Q96DM1 585 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 RPS6KC1Q96S38 1066 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
CCDC78-208ENST00000471861 MINDY3Q9H8M7 445 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 STK39Q9UEW8 545 aa22.21■■□□□ 1.15
CCDC78-208ENST00000471861 FANCMQ8IYD8 2048 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 STK25O00506 426 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 PAPLNO95428 1278 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 POMCP01189 267 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 URODP06132 367 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 DNM2P50570 870 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 AK2P54819 239 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 ANO5Q75V66 913 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 DGLUCYQ7Z3D6 616 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 VPS54Q9P1Q0 977 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 FAN1Q9Y2M0 1017 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 PRG3Q9Y2Y8 225 aaPredicted RBP22.2■■□□□ 1.14
CCDC78-208ENST00000471861 CEP250Q9BV73 2442 aa22.2■■□□□ 1.14
CCDC78-208ENST00000471861 F8W810 466 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 TDP2O95551 362 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 HOXA11P31270 313 aaPredicted RBP22.19■■□□□ 1.14
CCDC78-208ENST00000471861 USP11P51784 963 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 NTRK3Q16288 839 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 SPECC1Q5M775 1068 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 COL4A3Q01955 1670 aa22.19■■□□□ 1.14
CCDC78-208ENST00000471861 CNTNAP2Q9UHC6 1331 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 CCDC196A0A1B0GTZ2 297 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 POTEMA6NI47 508 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 GLUD1P00367 558 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 ALDH2P05091 517 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 ADH1AP07327 375 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 GLULP15104 373 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 Q4G0T1 1027 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 KIAA0319Q5VV43 1072 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 PHLDB3Q6NSJ2 640 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 CYP26C1Q6V0L0 522 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 COLGALT2Q8IYK4 626 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 ST13P5Q8NFI4 369 aaPredicted RBP22.18■■□□□ 1.14
CCDC78-208ENST00000471861 BICD2Q8TD16 824 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 TBCKQ8TEA7 893 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 SMG7Q92540 1137 aaKnown RBP22.18■■□□□ 1.14
CCDC78-208ENST00000471861 STAMQ92783 540 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 ARHGEF3Q9NR81 526 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 GPR179Q6PRD1 2367 aa22.18■■□□□ 1.14
CCDC78-208ENST00000471861 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 SP9P0CG40 484 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 RFX1P22670 979 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 NONOQ15233 471 aaKnown RBP eCLIP22.17■■□□□ 1.14
CCDC78-208ENST00000471861 DCLK2Q8N568 766 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 ZNF579Q8NAF0 562 aaKnown RBP22.17■■□□□ 1.14
CCDC78-208ENST00000471861 SMG8Q8ND04 991 aaKnown RBP22.17■■□□□ 1.14
CCDC78-208ENST00000471861 ETNPPLQ8TBG4 499 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 FAM193BQ96PV7 902 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-208ENST00000471861 RXFP1Q9HBX9 757 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 COL4A3BPQ9Y5P4 624 aa22.17■■□□□ 1.14
CCDC78-208ENST00000471861 ANHXE9PGG2 379 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 SPATA31D3P0C874 917 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 GLUD2P49448 558 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 DSC1Q08554 894 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 HTR4Q13639 388 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 SPATA31D4Q6ZUB0 917 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 MAML2Q8IZL2 1156 aaPredicted RBP22.16■■□□□ 1.14
CCDC78-208ENST00000471861 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 BRF1Q92994 677 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 NXPE3Q969Y0 559 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 DLL3Q9NYJ7 618 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 KANSL3Q9P2N6 904 aa22.16■■□□□ 1.14
CCDC78-208ENST00000471861 CYP3A7-CYP3A51PA0A087WV96 503 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 LRRN2O75325 713 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 LAMP2P13473 410 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 NCLP19338 710 aaKnown RBP22.15■■□□□ 1.14
CCDC78-208ENST00000471861 CYP3A7P24462 503 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 NPEPPSP55786 919 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 DSG1Q02413 1049 aa22.15■■□□□ 1.14
CCDC78-208ENST00000471861 PUM1Q14671 1186 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCDC78-208ENST00000471861 Q6ZUG5 572 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms