RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 AGBL3Q8NEM8 1001 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 WNK4Q96J92 1243 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 RPGRIP1Q96KN7 1286 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 TRAPPC9Q96Q05 1148 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 LRRC27Q9C0I9 530 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 ETNK2Q9NVF9 386 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 TIMM22Q9Y584 194 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 PCDHA5Q9Y5H7 936 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 A8MUI8 341 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 NFIBO00712 420 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 RGL2O15211 777 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 PGK2P07205 417 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 PDGFRBP09619 1106 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 SUPT20HL1Q3ZLR7 823 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 SHC4Q6S5L8 630 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 CCNI2Q6ZMN8 369 aaPredicted RBP10.67□□□□□ -0.7
NUP50-214ENST00000469163 FAM133AQ8N9E0 248 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 NDST4Q9H3R1 872 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 PCDHA12Q9UN75 941 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 MYH2Q9UKX2 1941 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 MYO3BQ8WXR4 1341 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 ENC1O14682 589 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 KDM1AO60341 852 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 GNA14O95837 355 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 MARK3P27448 753 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 CTTNQ14247 550 aaKnown RBP10.67□□□□□ -0.7
NUP50-214ENST00000469163 SLC39A14Q15043 492 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 KDM7AQ6ZMT4 941 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 RUFY4Q6ZNE9 571 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 CCNJLQ8IV13 435 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 MYO1HQ8N1T3 1032 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 DIS3Q9Y2L1 958 aaKnown RBP10.67□□□□□ -0.7
NUP50-214ENST00000469163 COL5A3P25940 1745 aaPredicted RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 GSTT2P0CG29 244 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 GSTT2BP0CG30 244 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 GSTM4Q03013 218 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ARHGEF16Q5VV41 709 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 LDHDQ86WU2 507 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 FAM114A2Q9NRY5 505 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ATAD3AQ9NVI7 634 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ITGB1BP2Q9UKP3 347 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 KIAA1024Q9UPX6 916 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 SALL1Q9NSC2 1324 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 TNRC6CQ9HCJ0 1690 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 SMIM23A6NLE4 172 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ZBED4O75132 1171 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 KCNJ2P63252 427 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 SLC35G1Q2M3R5 365 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 Q3C1V9 767 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ASPRV1Q53RT3 343 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 GPATCH4Q5T3I0 446 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 KRT79Q5XKE5 535 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 CYP26C1Q6V0L0 522 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 SNX27Q96L92 541 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 TDRKHQ9Y2W6 561 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ABLIM1O14639 778 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ACTN4O43707 911 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 SH3BP5O60239 455 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 HALP42357 657 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 IRF5Q13568 498 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 SGSM1Q2NKQ1 1148 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 MUM1Q2TAK8 710 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 CFAP58Q5T655 872 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 TMEM139Q8IV31 216 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 VSTM4Q8IW00 320 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 CASP10Q92851 521 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 MAELQ96JY0 434 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 EIF2AQ9BY44 585 aaKnown RBP10.66□□□□□ -0.7
NUP50-214ENST00000469163 BARHL2Q9NY43 387 aa10.66□□□□□ -0.7
NUP50-214ENST00000469163 SLC37A4O43826 429 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
NUP50-214ENST00000469163 RAD23BP54727 409 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 LACTB2Q53H82 288 aaPredicted RBP10.65□□□□□ -0.7
NUP50-214ENST00000469163 ZNF362Q5T0B9 420 aaPredicted RBP10.65□□□□□ -0.7
NUP50-214ENST00000469163 ADALQ6DHV7 355 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 DUS1LQ6P1R4 473 aaKnown RBP10.65□□□□□ -0.7
NUP50-214ENST00000469163 CABP7Q86V35 215 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 ANKS4BQ8N8V4 417 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
NUP50-214ENST00000469163 LAMA3Q16787 3333 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 NPHP3-ACAD11A0A0J9YXS1 232 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 TMEM150BA6NC51 233 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 KIF2BQ8N4N8 673 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 CCT6BQ92526 530 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 SH2D4AQ9H788 454 aa10.65□□□□□ -0.7
NUP50-214ENST00000469163 TMEM110-MUSTN1A8MSY1 372 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 PHF20L1A8MW92 1017 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 GCOM1H8Y6P7 765 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 ZBTB39O15060 712 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 SRGAP2O75044 1071 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 POLR2MP0CAP2 368 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms