RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 PTGDRQ13258 359 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 TMC7Q7Z402 723 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 ADGRD2Q7Z7M1 963 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 HACE1Q8IYU2 909 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 ASAP3Q8TDY4 903 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
CRAT-209ENST00000467343 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
CRAT-209ENST00000467343 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
CRAT-209ENST00000467343 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 PCDHB2Q9Y5E7 798 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 ATP6V1DQ9Y5K8 247 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 REV3LO60673 3130 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.69□□□□□ -0.22
CRAT-209ENST00000467343 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 PER2O15055 1255 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
CRAT-209ENST00000467343 IL9P15248 144 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 RPA1P27694 616 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 BCAR1P56945 870 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 CAPSQ13938 189 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 LRRC55Q6ZSA7 311 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 DEPTORQ8TB45 409 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 MINDY3Q9H8M7 445 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 RSAD1Q9HA92 442 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 XPNPEP1Q9NQW7 623 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
CRAT-209ENST00000467343 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 LINC01565O15544 149 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 SPATA31C1P0DKV0 1188 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 GLRA2P23416 452 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.22
CRAT-209ENST00000467343 AXLP30530 894 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 PTENP60484 403 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 KRT85P78386 507 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 PDE12Q6L8Q7 609 aaKnown RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 ZNF598Q86UK7 904 aaKnown RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 IFT74Q96LB3 600 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 CD207Q9UJ71 328 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
CRAT-209ENST00000467343 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
CRAT-209ENST00000467343 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 MEIS3P2A8K0S8 358 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 LAD1O00515 517 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 TSPAN1O60635 241 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 NPTXRO95502 500 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 POMCP01189 267 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
CRAT-209ENST00000467343 ARL2P36404 184 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
CRAT-209ENST00000467343 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
CRAT-209ENST00000467343 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
CRAT-209ENST00000467343 PCBP1Q15365 356 aaKnown RBP eCLIP13.67□□□□□ -0.22
CRAT-209ENST00000467343 RASSF8Q8NHQ8 419 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 C2orf40Q9H1Z8 148 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
CRAT-209ENST00000467343 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 GOLGA6L22H0YM25 854 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 OFD1O75665 1012 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 TOB1P50616 345 aaPredicted RBP13.66□□□□□ -0.22
CRAT-209ENST00000467343 ERVFC1P60507 584 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 PLCB3Q01970 1234 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 MBTD1Q05BQ5 628 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 CAMK1Q14012 370 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 PPP2R5AQ15172 486 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
CRAT-209ENST00000467343 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 EFHBQ8N7U6 833 aa13.66□□□□□ -0.22
CRAT-209ENST00000467343 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms