RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 WASF1Q92558 559 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 TMEM175Q9BSA9 504 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 SFXN1Q9H9B4 322 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 UBN1Q9NPG3 1134 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 SSX2IPQ9Y2D8 614 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
GTF3A-205ENST00000466776 C2CD4DB7Z1M9 353 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 SLC37A4O43826 429 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 OFD1O75665 1012 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 ALDH2P05091 517 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 YWHABP31946 246 aaKnown RBP13.35□□□□□ -0.27
GTF3A-205ENST00000466776 NPY5RQ15761 445 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 C4orf19Q8IY42 314 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 ACSF2Q96CM8 615 aaPredicted RBP13.35□□□□□ -0.27
GTF3A-205ENST00000466776 MTRQ99707 1265 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 LXNQ9BS40 222 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 PHF20Q9BVI0 1012 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 DHX33Q9H6R0 707 aaKnown RBP13.35□□□□□ -0.27
GTF3A-205ENST00000466776 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 DPP7Q9UHL4 492 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
GTF3A-205ENST00000466776 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 EML1O00423 815 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 NR1I2O75469 434 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 KLRC2P26717 231 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 AXLP30530 894 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 SLC11A1P49279 550 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 NPEPPSP55786 919 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 TCF15Q12870 199 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 TFDP1Q14186 410 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 EMC2Q15006 297 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 EPHA7Q15375 998 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 NCAPH2Q6IBW4 605 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 CCDC149Q6ZUS6 474 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 HACE1Q8IYU2 909 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 AIFM3Q96NN9 605 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 MFSD1Q9H3U5 465 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
GTF3A-205ENST00000466776 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
GTF3A-205ENST00000466776 ST18O60284 1047 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 URODP06132 367 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 ITGA4P13612 1032 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 EPCAMP16422 314 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 SCRN1Q12765 414 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 PTPN14Q15678 1187 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 NOTUMQ6P988 496 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 OTOP3Q7RTS5 596 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 MRPL10Q7Z7H8 261 aaKnown RBP13.33□□□□□ -0.28
GTF3A-205ENST00000466776 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 SLC22A17Q8WUG5 538 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-205ENST00000466776 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 CDH22Q9UJ99 828 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 CACNA1HO95180 2353 aa13.33□□□□□ -0.28
GTF3A-205ENST00000466776 MEIS3P2A8K0S8 358 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 BRD1O95696 1058 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
GTF3A-205ENST00000466776 ADH1AP07327 375 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
GTF3A-205ENST00000466776 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
GTF3A-205ENST00000466776 C12orf76Q8N812 135 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-205ENST00000466776 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-205ENST00000466776 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
GTF3A-205ENST00000466776 PFKFB2O60825 505 aa13.31□□□□□ -0.28
GTF3A-205ENST00000466776 POMCP01189 267 aa13.31□□□□□ -0.28
GTF3A-205ENST00000466776 SOD2P04179 222 aa13.31□□□□□ -0.28
GTF3A-205ENST00000466776 KRT2P35908 639 aa13.31□□□□□ -0.28
GTF3A-205ENST00000466776 CLCN4P51793 760 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms