RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GAAP10253 952 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 PHKG2P15735 406 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 CTSSP25774 331 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 KCNQ1P51787 676 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 PPP3CAQ08209 521 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZNF827Q17R98 1081 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZNF385BQ569K4 471 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 THEMIS2Q5TEJ8 643 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 Q6ZUG5 572 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 CATIPQ7Z7H3 387 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 TTC7BQ86TV6 843 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 RTKN2Q8IZC4 609 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 YTHDC1Q96MU7 727 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 C7orf25Q9BPX7 421 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 SARGQ9BW04 601 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 TMEM168Q9H0V1 697 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 EPB41L4AQ9HCS5 686 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 NTMQ9P121 344 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 DNAI1Q9UI46 699 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 CNOT6Q9ULM6 557 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 PTPN22Q9Y2R2 807 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 TCAF2A6NFQ2 919 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 RFXAPO00287 272 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 SLC16A6O15403 523 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 AKR1B10O60218 316 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 ENDOD1O94919 500 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 HRGP04196 525 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 IL12RB1P42701 662 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 SARSP49591 514 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 MEOX1P50221 254 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 WNT3AP56704 352 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 DLX2Q07687 328 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 UBE4AQ14139 1066 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZNF267Q14586 743 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 GRM3Q14832 879 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 NOMO1Q15155 1222 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 MIGA2Q7L4E1 593 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 C11orf96Q7Z7L8 435 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 CLEC14AQ86T13 490 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 GRAMD1CQ8IYS0 662 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 KLHL36Q8N4N3 616 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 MARCH10Q8NA82 808 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 NUDT10Q8NFP7 164 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 CYFIP2Q96F07 1278 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 NUDT11Q96G61 164 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 UIMC1Q96RL1 719 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 ACO2Q99798 780 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM204AQ9H8W3 233 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 BARX1Q9HBU1 254 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 KCTD3Q9Y597 815 aa5.59□□□□□ -1.51
CDC42BPA-211ENST00000466538 SGTAO43765 313 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 TMEM127O75204 238 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 GASTP01350 101 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 HNRNPLP14866 589 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 STAT5BP51692 787 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 UBE3CQ15386 1083 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 VWA3BQ502W6 1294 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM26FQ5R3K3 315 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 CYB5RLQ6IPT4 315 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 KSR2Q6VAB6 950 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 ATG14Q6ZNE5 492 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 DENND1CQ8IV53 801 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 PLA2G15Q8NCC3 412 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 DPF2Q92785 391 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 TMEM60Q9H2L4 133 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 MANSC1Q9H8J5 431 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 KMT5AQ9NQR1 393 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 DDX21Q9NR30 783 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 ADAM29Q9UKF5 820 aa5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 SMG5Q9UPR3 1016 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 CTDP1Q9Y5B0 961 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-211ENST00000466538 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 TUSC2O75896 110 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZBED1O96006 694 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 CYP1A1P04798 512 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 PI3P19957 117 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 KIR2DL3P43628 341 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 USP10Q14694 798 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 SSPNQ14714 243 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 PCOLCEQ15113 449 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 C3orf36Q3SXR2 165 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZMAT1Q5H9K5 638 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 PPP4R4Q6NUP7 873 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 ABHD15Q6UXT9 468 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 TMEM151BQ8IW70 566 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 CAMKK1Q8N5S9 505 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 PIK3C3Q8NEB9 887 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 PJA1Q8NG27 643 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 DACT3Q96B18 629 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 SLC38A3Q99624 504 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 OR10A2Q9H208 303 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 C14orf93Q9H972 538 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 BCO1Q9HAY6 547 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 DMRT3Q9NQL9 472 aa5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 DDX20Q9UHI6 824 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-211ENST00000466538 POLHQ9Y253 713 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms