RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DNAJB4Q9UDY4 337 aa21.37■■□□□ 1.01
COL9A3-206ENST00000466532 PCDHA12Q9UN75 941 aa21.37■■□□□ 1.01
COL9A3-206ENST00000466532 C2orf16Q68DN1 1984 aa21.37■■□□□ 1.01
COL9A3-206ENST00000466532 BTBD18B2RXH4 712 aa21.36■■□□□ 1.01
COL9A3-206ENST00000466532 HOXA11P31270 313 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-206ENST00000466532 MRPL10Q7Z7H8 261 aaKnown RBP21.36■■□□□ 1.01
COL9A3-206ENST00000466532 ZNF280BQ86YH2 543 aa21.36■■□□□ 1.01
COL9A3-206ENST00000466532 TMEM87AQ8NBN3 555 aa21.36■■□□□ 1.01
COL9A3-206ENST00000466532 BCL7CQ8WUZ0 217 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-206ENST00000466532 RSAD1Q9HA92 442 aa21.36■■□□□ 1.01
COL9A3-206ENST00000466532 CNTNAP2Q9UHC6 1331 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 PLXNA3P51805 1871 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 TMEM221A6NGB7 291 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 M0R296 226 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 JAK2O60674 1132 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 ERLIN2O94905 339 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 CTSAP10619 480 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 SP100P23497 879 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-206ENST00000466532 SLC11A1P49279 550 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 NEK4P51957 841 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 TRIM29Q14134 588 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 GIT2Q14161 759 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 UBXN11Q5T124 520 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 CES5AQ6NT32 575 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 DIS3L2Q8IYB7 885 aaKnown RBP21.35■■□□□ 1.01
COL9A3-206ENST00000466532 KCNH6Q9H252 994 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 TTC12Q9H892 705 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-206ENST00000466532 XPNPEP1Q9NQW7 623 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 CDH22Q9UJ99 828 aa21.35■■□□□ 1.01
COL9A3-206ENST00000466532 B4GALT3O60512 393 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 NEMFO60524 1076 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 DDHD2O94830 711 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 ITIH3Q06033 890 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 MXD4Q14582 209 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-206ENST00000466532 BMP8AQ7Z5Y6 402 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 FBXL18Q96ME1 805 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 CCDC43Q96MW1 224 aaKnown RBP21.34■■□□□ 1.01
COL9A3-206ENST00000466532 FAM193BQ96PV7 902 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-206ENST00000466532 HSD17B14Q9BPX1 270 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 ADAM7Q9H2U9 754 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 IRAK3Q9Y616 596 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 WDFY4Q6ZS81 3184 aa21.34■■□□□ 1.01
COL9A3-206ENST00000466532 WNT7AO00755 349 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 LYPLA2O95372 231 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 NCLP19338 710 aaKnown RBP21.33■■□□□ 1.01
COL9A3-206ENST00000466532 TXKP42681 527 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 AFF1P51825 1210 aaKnown RBP21.33■■□□□ 1.01
COL9A3-206ENST00000466532 PBXIP1Q96AQ6 731 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 NECTIN4Q96NY8 510 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 VN1R3Q9BXE9 311 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 TSHZ2Q9NRE2 1034 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 ANKEF1Q9NU02 776 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 KANSL3Q9P2N6 904 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 NR2E1Q9Y466 385 aa21.33■■□□□ 1.01
COL9A3-206ENST00000466532 MTCL1Q9Y4B5 1905 aaKnown RBP21.33■■□□□ 1
COL9A3-206ENST00000466532 TSPAN1O60635 241 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
COL9A3-206ENST00000466532 DGAT1O75907 488 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 POMCP01189 267 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 ITGA4P13612 1032 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 AXLP30530 894 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 PTENP60484 403 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 TFDP1Q14186 410 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 PCBP1Q15365 356 aaKnown RBP eCLIP21.32■■□□□ 1
COL9A3-206ENST00000466532 PTPN21Q16825 1174 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 RARS2Q5T160 578 aaKnown RBP21.32■■□□□ 1
COL9A3-206ENST00000466532 SMG8Q8ND04 991 aaKnown RBP21.32■■□□□ 1
COL9A3-206ENST00000466532 CNNM3Q8NE01 707 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 TMEM175Q9BSA9 504 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 POMKQ9H5K3 350 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 DZANK1Q9NVP4 752 aa21.32■■□□□ 1
COL9A3-206ENST00000466532 INO80B-WBP1J3KQ70 363 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 ALDH2P05091 517 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 EPCAMP16422 314 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 MTHFRP42898 656 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 SIGLEC14Q08ET2 396 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 NCBP1Q09161 790 aaKnown RBP21.31■■□□□ 1
COL9A3-206ENST00000466532 CAPSQ13938 189 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 PTPN14Q15678 1187 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 ERICH6BQ5W0A0 696 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 NOTUMQ6P988 496 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 ZBTB33Q86T24 672 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 C12orf76Q8N812 135 aaPredicted RBP21.31■■□□□ 1
COL9A3-206ENST00000466532 ASAP3Q8TDY4 903 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 SLC22A17Q8WUG5 538 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 CPB2Q96IY4 423 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 MTMR9Q96QG7 549 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 EIF2AQ9BY44 585 aaKnown RBP21.31■■□□□ 1
COL9A3-206ENST00000466532 UBN1Q9NPG3 1134 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 STK39Q9UEW8 545 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 FAN1Q9Y2M0 1017 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 IPPQ9Y573 584 aa21.31■■□□□ 1
COL9A3-206ENST00000466532 POTEMA6NI47 508 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 NRP1O14786 923 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 SSBP05455 408 aaKnown RBP eCLIP21.3■■□□□ 1
COL9A3-206ENST00000466532 WEE2P0C1S8 567 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 RARRES1P49788 294 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 NHLH1Q02575 133 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 POU5F1BQ06416 359 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 ST3GAL1Q11201 340 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms